Conserved Protein Domain Family
HPS6

?
pfam15702: HPS6 (This model is not part of the current CDD release)
Hermansky-Pudlak syndrome 6 protein N-terminal domain
This entry represents the N-terminal beta propeller domain of the HPS6 protein.
Statistics
?
PSSM-Id: 521962
Aligned: 8 rows
Threshold Bit Score: 473.037
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_015203384   1 MKHLALD-QLADLGEFTGGGDLTEYLkqsnmkscnWSALRD-----IRISPDGQHIHVIlh----kPKGGLMTFDRLQRt 70 
XP_012823227   2 MKFGPPQ-LECDFQAFGRQHVLREAL---------HTPGSR-----LYHSPDGRHLFVL-------LPHKVLSFLRLPSq 59 
3_pfamImport   2 KRSGDMNtLLSDFRDYAGSQKLSDLLtf------sKDEPSRiklsdVRVSPDGRHVHVLlr----qPKVGLMTFDKHERp 71 
NP_001075055   2 KRAGTLR-LLSDLSTFSGAARLRELLa--------GDPAVR-----VRCSPDGRHLLLLrpp--gsPAPQLLVAVR---- 61 
1_pfamImport   2 KRGASLR-LLSDLSDFSCAAQFRELLa--------RDAAIR-----LRCSADGRHLLLLsgp--gaPAPQLLVAAR---- 61 
XP_008114270   4 ARTLLLR-QILDWDDFIHSRALRELLl--------DQLPNR-----VLASPDGQHLLLL-------CRSRVVAFQRLGT- 61 
XP_015144270   2 KPAGTLR-QLSDFSDLSRGRRLRELLr-------hGEEPRS-----VRPSPDGRHLVVLqenrpppLPPRVVAFQRQG-- 66 
XP_006012330   1 MKEFVLE-KLSDFSDFARHKSLVEILr-------rWQAGSG-----VLASPDGRHLLLLtggsqemKEQQLSTFDR---- 63  coelacanth
XP_015203384  71 hqlQNHKHLD-LGSGTSGKIVD--------------------LVYLGQRd-kDGGSsDL--AVVQENGGVEFW---RyEE 123
XP_012823227  60 aplSPSAYLEkSWAAHSPPLSA--------------------LLFPQCV---PHGW-AL--TLLWQNGRTEIWsppR-SA 112
3_pfamImport  72 qlaLNPKKLD-VWFKGGVSIVD--------------------VFYLDLLh-nKGKGtGVvaVVVYENGKAEFW---KfLD 126
NP_001075055  62 ---GPGEELEsAWPPGQPSPLD--------------------AFLLPWRa-rS----AL--VLVWESGLLEVW---G-SG 107
1_pfamImport  62 ---GSGAGLErAWPEARAAPLD--------------------AIFLSWPa-rP----AL--ALVWESGLVELW---G-TD 107
XP_008114270  62 ---EGGGDLErSWHPPQPPVVG--------------------LFFLESPs-aAIPW-VL--GVVWERGKAELW---R-FV 110
XP_015144270  67 ---GGGAELErSWQPPQPALAG--------------------LVFPQSPa-aPGRW-AL--GIVWEHGRTELW---R-FV 115
XP_006012330  64 -----------IWSCSPPAPLQppgyldksfsriglaglfflE---SRRgaaPAPAtAV--GIVLENGRTEFW---RyAP 124 coelacanth
XP_015203384 124 CKAGWYLQQTSELCNSPRAKVVSVCASGNVIIWSEERPPSESSlSSTAARNNFQYCICTRTYEL-EERGVCLGGVNIMLH 202
XP_012823227 113 LSKGWELLQSLDLCNSPRARLASVCSNGESLVWCEERPPSEAKlQGPSGAKAYRHCICHRRLVWeGEQQVTLGSMNILLH 192
3_pfamImport 127 YKTGWYLLQTSDLCNSPRARVLSVCVCSSLLVWCEERPASENSsALSSTRNKLRYCICRRDCEV-EDGAVNLGGLKIILH 205
NP_001075055 108 VGPGWRLLQSTELCPGGGARVVAAAAPRGRLVWCEERPAGTEG-QLGPPAVAFSHCVCVRTLEPsGEAGTNLGSTHILLH 186
1_pfamImport 108 LGPAWRRLHTTELCPH---------APRGRLVWCEERPDGAGG-----------HRVCVRTLEPgGETGVRLGRTHVLLH 167
XP_008114270 111 PSTGWHMLQSLELCHGGRARIISVCSWRGQLVWCEERPALGAL--MTPERRAFQYCICTRSLQI-GEQGAQLSPLRVILH 187
XP_015144270 116 PAAGWQLLQTLELCQGARARVVSVCSQAASLVWCEERPPLDAH--SDASKCAFRFCVCARALEL-GEQGVRPGPVRIVLH 192
XP_006012330 125 CQARWELAQTANLCNSPRARVVSVCSQGQLIVWCEERPPSESS--LTPAKSAFSYCICKRTFEL-REPGVELGSVQIVLH 201 coelacanth
XP_015203384 203 NSPRYAVIASADNVYLLPDnnETKLSSISKFFLTWSPDPDSITVSSACKGTLLRKDLHLSKESd--FKRLISDCVGLLST 280
XP_012823227 193 HSPFFHLLSSPNHIFMVPD--GNLRTNGARLLLVYSPQDERINMATITKGLIHSKSISECESD---FKKLVLECLGYMAS 267
3_pfamImport 206 NNPKFTVISSGDYVHLLPDlkAKLQLCISKFFLTWSPHHDSFTISTTCKNTPIKK-LSAKESD---FRQLIADCLGYLSA 281
NP_001075055 187 HCPAFGLLTSRKDLFLVPT--ATTWPGLGHILLIWSPSKGKVVVAAPCLGLSHSKSLNPGRGDtwdFRTLLRGLPGLLSP 264
1_pfamImport 168 HCPPFRLLASRKDVFLGPT--ASAWPGAAHILLTWNPSKGKVMVTAPRLGLSYSKSLNPKQGDtwdFRTLLRGFPGLLYP 245
XP_008114270 188 NSPLYQVLASPSGVFLVPT--PDTFTNIAKFIIIWQPENATISVAAPSRGCICTKASHPGSEVd--FKKLVLGYVSFLAS 263
XP_015144270 193 NCPEYRVLASPQHVFLLPA--SGAFATASNFLLVWHPEQAKLTIAAPSAGFVRSKALRSGSGSd--FRKLLLGSVGLLSA 268
XP_006012330 202 NSPSYQVLSAADGVFLWPS--DASLGSVSKCLLIWTPWDDRVTITAPAKGYVKTKNLNPLESD---FKRFVLDCVGFLSS 276 coelacanth
XP_015203384 281 INPPEIIAFSATGCGGLLVLLGSGWISMLQKDGVLRRIYKLADNCLYDCSLcSSMHVYGGVLALTVDRTLYLIDIRCGTE 360
XP_012823227 268 QIPVGIRSFAVTGLGELLLMDALGGVHLLHPNGMVRCIYVFDSITLTPEVR-VSMQIYGATLVCAFDTVLYLIESNTGKL 346
3_pfamImport 282 LEPPEICSFSPTGCGGLLLLLNTGWLYILQEDGMLRRMYKLADNFTPQADThTSLCFYVNIVALMVGKTLHLIEVNCGTE 361
NP_001075055 265 RQPLTVHTWAPTP-QGLMWLDFRGTVSLVQPHGGSRTVGTLQEAPASLAGS-AALGTFHGTLACVLGSTLELLDMGSGQL 342
1_pfamImport 246 GEPLAVHTWAPTP-QGLLLLDSRGTIILVQAHGGTRTVGALQEASIGLEST-AALGAFNGTLACVLGSTLELLDMSTGRL 323
XP_008114270 264 MDVLIIHGCALSSCGGLLLVTKAGMVELVQPNGTWRPVFDFGESAVAPGQQ-VQLKAFGSTLACLLGGALHLVDLDSRQL 342
XP_015144270 269 LAPLDVHTCAVSSCGALLLVSRKGAVTALEADGTQRHVFDLEAGPLARGDA-VELKTYGSTLACVLAGVLYLVDQNSGRV 347
XP_006012330 277 VEPCDAHHVGVSHCGGLLLVDRSNAIILIQSDGTKRHIYSFPDGSFGPDSK-MVVQIAGTTLVCVLGRILYLVNVSTGKL 355 coelacanth
XP_015203384 361 LEKIPLKKEGVLFVN----CRE-----------RNVPHLLTESGLFVA 393
XP_012823227 347 LEKKILSSDEVRLMN----LPE-----------VDDIHLMTKAGIYKV 379
3_pfamImport 362 LQKIALKREGLLYAN----QAD-----------RRTPFLLSETGLFML 394
NP_001075055 343 LERKILSTDRVHLLE----PPApgmedqeeletRGGLRLLSAVGLFQV 386
1_pfamImport 324 LERKVLSTDRVHLLE----PPAlamkdgeeletRRGLRLLSALGLFHV 367
XP_008114270 343 IEKKGLSTDGVLFLDfgtgVGE-----------EEEMQLLAPNGIYNL 379
XP_015144270 348 IEKKILSMKEVHFLEs---PGE-----------EDSIQFLTPTGIYSF 381
XP_006012330 356 MEKMVLTTDVLTLLK----PHN-----------RNAIQILTKTGIYTA 388 coelacanth
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap