9FMD


Conserved Protein Domain Family
NKAP

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pfam15692: NKAP (This model is not part of the current CDD release)
NF-kappa-B-activating protein
NKAP is a family of eukaryotic proteins that interacts with NF-kappa-B. It is a nuclear regulator of TNF- and IL-1-induced NF-kappa-B activation. NKAP does not interact with RIP in mammalian cells family is often found in association with pfam06047.
Statistics
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PSSM-Id: 521957
Aligned: 34 rows
Threshold Bit Score: 33.1597
Created: 17-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
9FMD_z        120 KEREESLr--------qKRLSERERigelGAPEVWGLS------PKNPEPDSDEHTPVEDEe----------pKKSTTSA 175 human
XP_046463372   71 RVMERARtegg--nrwtKKLLDEEA----KDPDRWGHSgfkemyKNELGISRs-------------------rRSRSREK 125
EGI64175       23 SVMRKAReshs--sywnKKLLEAEE----RDPNRWRHSgykelyVG---SSSEPSRGHPKSprs------prsRSPHSPR 87 
XP_026298975   45 SVMRKAResqs--sywnKKLLEVEE----RDPNRWRHSgykelyVGGT-TSGEPSRGHPRSprs------prpRSPHIQR 111
XP_011269469   45 NVMRKAResqs--sywnKKLLEAEE----RDPNRWRHSgykelyVGGTGGSGEPSRGHPRSprs------prpRSPHSPR 112
XP_011154449   46 NVMRKAResqs--sywnKKLLEAEE----RDPNRWRHSgykelyVGGTGSGEPSSRGHPRSprs------prpRSPHSPR 113
XP_049531289   56 NVMKKARafpn--etwdKKLLEAEE----KDPNRWRHSgykklyLEDDPSSSDSERPVrfgng----------------- 112
10_pfamImport   1 NVMKKARagtn--dywdKKLLEVEE----KDPNRWRHTgfkkmyIEGDESGSSGGESDRES------------RYKRSNN 62 
XP_002006237   39 NVMKKARanttn-dywdKKLIEAEE----KDPNRWRHTgykkmyIQGESSSGESERDSAQAsysrysgapgnaGPPPSSA 113
XP_008190447   48 TVMKKARaspnsnaywdKKLLEVEA----KDPNRWRHSgykslyIDGSSSPSSGHRSRSRSptg-------rrSPPRRSP 116
9FMD_z        176 STse--eeKKKKSSRSKERS 193 human
XP_046463372  126 TSar--rsRSRERAHKIESG 143
EGI64175       88 PRsp--rtRSPRSPRERSSR 105
XP_026298975  112 PRsp--rtRSPRSPRDKSHT 129
XP_011269469  113 PRsp--raRSPRSPRERSSR 130
XP_011154449  114 PRsp--raRS-RSPRERSTR 130
XP_049531289  113 ----grrsRSPRSP-PRNRR 127
10_pfamImport  63 GRer--eeVYRRQSRSRSRS 80 
XP_002006237  114 SSsa--ryGRSRSPHSRSRS 131
XP_008190447  117 VRrspvsrRSPRSPIARRSP 136
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