8IQF


Conserved Protein Domain Family
CAF-1_p60_C

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pfam15512: CAF-1_p60_C (This model is not part of the current CDD release)
Chromatin assembly factor complex 1 subunit p60, C-terminal
This entry represents the C-terminal domain of chromatin assembly factor 1 subunit B (CAF1B) from animals. CAF1B forms the CAF-1 complex alongside CAF1A and CAF1C, which plays important roles in DNA synthesis and repair and participates in the progression of various malignancies. CAF1B interacts with the two Anti-Silencing Factor (ASF1) paralogues ASF1a and ASF1b in order to contribute in DNA replication and repair-coupled chromatin assembly. This domain has been suggested to interact with ASF1 in order to facilitate the transfer of histones H3-H4 to CAF-1 through an interacting motif called B domain. This domain also has what is known as a PEST box, a region enriched in P, E, S, T and D residues, which has been correlated to short in vivo half-lives.
Statistics
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PSSM-Id: 521889
Aligned: 16 rows
Threshold Bit Score: 110.273
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8IQF_B       410 SPGPRPVEGTPASRTQDPSSPGTTPPQARQAPAPTVIRDPPSITPAVKSPLPGPSEE-KTLQP-SSQNTKAHPSRRVTLN 487 human
Q4V8B4       417 SPGSRSAEGTPSNRIQDPSSPCTTPSPTTQSPAPPAIKDSPSAIPAGKSPLPRPSEE-KTLQP-AAQNMKAPQPRRVTLN 494 Norway rat
XP_005606201 419 LPGPRLAEGTPTSRTQDPSSPGTPPPQVKQSPASTAAKDTPGTAPGARSSLPGSSEE-KTLQP-SSQNVKAHPSRRVTLN 496
NP_001091483 423 SPGPRLGEGTPTGRVQDPSSPSTTPPQAKQSQAPPAAKDTPMAALGARGSPAGPPKE-KPLQP-SGQNAKAQPSRRVTLN 500
1_pfamImport   1 SPGPRLGEGTPASRIPDPGSPCPAPAPGKPSAAP-APKDSPSTAATARGAAPRPSEE-KS-PP-SSQTTKAPPPRRVTLH 76 
XP_007493216 415 SPSPRPLDGTPTSRPPDPS-PSVTPLQARQSPAQAMNRDSPMSPLGVRGSPSLSSEErKTPQA-CSQNPKLSQPRRITLN 492
XP_023354627 415 SPSPRPVEGTPTSRNQDPN-STVTPLQAKQSPAITVNKDLPMSPLGNRNSLNLSSEEkKTPQA-YIQNTKSSQPRRITLN 492
XP_007667919 417 SPVPRPTEGTPPVRTRDPGTPSP-PLQAKQPPALPGPREPSSTPPGGRSSATPPSEErRDPQPgGGHPGKGKQPRRVTLN 495
XP_003219064 418 SPPAKAVDSSPPSRAVDSAVQCKTSVNN---------SDVPSTPIVVRNVPVSSPEKkKPTHP-SSHSSKPNQPRRVTLN 487
Q5R1S9       419 SPGSRLTEGTSL---STPTLQPKTPVAAA--------KDLPSTPVGIKNVPVSSSEErKISQP-ASQSTKVNQPRRITLN 486 chicken
8IQF_B       488 TLQAWSKTTPRRINLTPLKTDTPPSSVPTSVISTPSTEEIQS--ETP---GDAQGSPPELKRPRLDE 549 human
Q4V8B4       495 TLQSWGKTAPRRINLTPLRADTAPNPLPSSG-AAPSTEEVQP--EVP---GEPQDEPPELKRPKLEE 555 Norway rat
XP_005606201 497 TLQAWSKTTPRRINLIPLKTDTPLNSVPNSIISTSATEEVQS--EMP---GDPQGSPPEPKRPRLSE 558
NP_001091483 501 TLQAWSKPTSRRINLIPLKTDSPLNSISTPLTSSPSTEEIQSasETP---ADPQVSPLELKRPRLGE 564
1_pfamImport  77 TLQAWSKT-PRRVTVMPLKTDAP-NSAPGGVVSAPPME-VQP--EPP---GDVQVSSPERKRPRLAE 135
XP_007493216 493 TLQAWSKTPPRRINLTALKTDAQTNNAQGSTVSVPSVEVCQP--ETP---EDTLCNSPETKRLRFSE 554
XP_023354627 493 TLQAWSKTTPRRINLTALKTDAQTCTPQVNAVSVPSIEACQP--EVP---EDTLCSSPESKRLKFNE 554
XP_007667919 496 TLQAWSKSTPRRISLMPLKPDPPASDAPGQAAPTPSADTVQP--ELS---DDPECKPPESKRPRLAP 557
XP_003219064 488 PIQAWSKT-PRRVALIPLKADSLDSAPLNPVPSASSTETVQH--ERPsppEDPSQNPPAPKRFRTDD 551
Q5R1S9       487 TLQAWSKT-PRRVNLIPLKPDTPASVYTDTVPVPPSSEQ-EH--ERPlpsGDSLQNPPASKRPRTEE 549 chicken
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