Conserved Protein Domain Family
CTC1_2

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pfam15491: CTC1_2 (This model is not part of the current CDD release)
CST, telomere maintenance, complex subunit CTC1
CTC1 is one of the three components of the CST complex that assists Shelterin to protect the ends of telomeres from attack by DNA-repair mechanisms. This family largely represents sequences from plants species.
Statistics
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PSSM-Id: 521878
Aligned: 6 rows
Threshold Bit Score: 368.727
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_006848539   78 HYPAIITGTVNLWTNGssyNLCSMK-----DCFSFTDs-ESRTICCAILNLNLDIIGKIINVTSWNFIPSK--------- 142 
XP_015575646   66 THPAVLVGSLTLPTET---LKCTNK-----NCFQFSD--GSSTICCDILDFSVPVIGKRIHVLSWNFIPLKh-------- 127 
D0EL35         62 NYPTVIFGTVALPSET---LKCPNR-----YCFRFTD--GDLTICCDILGFEFRAIGSKICVLSWNFLPMN--------- 122  thale cress
1_pfamImport    3 NYPAVIVGTLALPSET---LKCPNR-----YCFRFTD--GVSTICCDIIGFEIRAIGSTIRVLSWNFIPTNh-------- 64  
EFJ34264       58 rvPWVIVGKIQLWNEG---FCCHSSsghsgDSFALAD--DTGVGCCLLRNVDQCPLGSKVVITSFNYIPSIrklkpekar 132 
XP_044388654   69 PHPVLLAGTLSLPSAD----ACRN------HCLSLTDpsSAASVCCYLLDFDPAVIGREILVLAWNYLPSVr-------- 130 
XP_006848539  143 ----------CTG------GFLEIIEWKPIEPSLYNNSDCDDDLLSFRLASAYNGDRlIGSSGNGKSRISGQLVSISPVF 206 
XP_015575646  128 ----------SPG------GFLEIIKCSFPDSTNNIALSRCSSVDSIPIISVPSPSS-KEDRLKARYRLHGPIESISPVS 190 
D0EL35        123 ----------HSG------GFLEIINWKFVDSGSL--LSRCSGISSFPLI--PSLYSsQNGDRKSRYSVCGVLESISPVS 182  thale cress
1_pfamImport   65 ----------HGG------GFLEIIKWRFVEEM----LSRC----SFPLVPPPPRSSvENGGGKSRYSVRGVLESVSPVS 120 
EFJ34264      133 edclsvclevHELhvvqdgSILQVFPRLCLSPASA--DVKNEMLETPPL---------KRSGGKARLTLRGCLHCFSPSF 201 
XP_044388654  131 ---------qHEA------GVLEAVRWRLAEAPGPVPVPGLSFLAAIPLNSVD-----AEPALPTRGRVFGMVRSVSVVF 190 
XP_006848539  207 VVPCEAedgaskaqeiqycskiqqnfekllstasikapkrlklNSSkslngledvkavrGAETTS--GFLVELLVCNCIS 284 
XP_015575646  191 IVPCSV-------------------------------------GAN-------------KSKNLR--GFIAQIRVCECKL 218 
D0EL35        183 VVPCMD-------------------------------------GVSs------------DSVNLP--GFLVHVMACECKV 211  thale cress
1_pfamImport  121 LVPL---------------------------------------GSD-------------DSVNVPvkGFLVKVMACECKE 148 
EFJ34264      202 ALPCTG-------------------------------------STFsmakslfaggekgDGQVLK--GFLVELRNCSHQR 242 
XP_044388654  191 SVPHAT-------------------------------------QKS----------------DLV--GFIAEMMCCGCRQ 215 
XP_006848539  285 CRKEKslgthiydPSNDPSHVFSlKSLFVYFCGA-AVVWRPVFLSLNGKLISFVGLKKKMVVVGKGEAYPMYVTTQETVI 363 
XP_015575646  219 CISKEp------iKPEQQTHVFT-KPSFVYFFGS-SMSWHPVITKLVRKVVTLSGLKKKLVFIGKEESQLMFVITENSVI 290 
D0EL35        212 YSR----------DAIDCGHAFE-RSVFVYFCGLeAASWHPVVMKLVGRNVALSGLKRKLVYV-RGDSLLVFVTTENSVL 279  thale cress
1_pfamImport  149 CRRKDv------lDSVDSSHCFD-KAVFVYFCGSvAASWHPAIVKLVGRNIALSAMKKKLVYISKCDSLLVFVTTENSLL 221 
EFJ34264      243 LRSKK--------DAEEDGQLVR-----VFFSGA-LSAWRPVLLDCVGSWICITGLRKKMISVGPKDLHLILAATRTTFV 308 
XP_044388654  216 CKLSQ--------PESDRGHKFE-MEKFVYFVDL-ASRWRPVLARLIGRPVSVTGLKKKMVSVGKKGSYTMLVSSTATMV 285 
XP_006848539  364 HLSPSLSGRRAfpfkgceisfmLRREtISFGKGIISN-YTGRVTGTYMQGMVVELDSTVWLVLTDQLIPPVHALRVGA 440 
XP_015575646  291 HLPRVAKNWSP-----------FLRN-VVLGKGECGD-YKGAVSVVYMQGMVVELDKEVWLLLTDQLLAVPHSLRVGA 355 
D0EL35        280 H-PPWLSKKGT-----------VSKT-VVDRRGNCGS-YRGYVRGLYLKGKLVEMDEDVWLLLTDQILNRSHSIRTGS 343  thale cress
1_pfamImport  222 H-SPWISKKDE-----------SFKS-VVDGRGNCGS-YLGFVNGLYMKGKLVELDEDVWLLLTDQIHNRSHSIRTGS 285 
EFJ34264      309 SRTPDELERPR-----------SLRSdLVRDKKTFGS-YVGVVTGVQFEGRMVELDENVCLLLTHQEHTFLHGLRVGA 374 
XP_044388654  286 SWCPSYVGVPP-----------LDEL-----PGKCSGvYTGVVSGIHMQGMLVELDEIVWLLIDDKRLVPSHSLRVGA 347 
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