Conserved Protein Domain Family
FAM60A

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pfam15396: FAM60A 
Protein Family FAM60A
This protein family, FAM60A is a family of proteins is found in eukaryotes. It is known to be a cell cycle protein that binds to the promoter of a gene transcription repressor complex, named SIN4-HDAC complex. This means that FAM60A has an important role to play in 'switching on' gene expression. Proteins in this family are typically between 179 and 324 amino acids in length.
Statistics
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PSSM-Id: 495070
Aligned: 18 rows
Threshold Bit Score: 224.965
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EDV99927       2 FNFHKPRVYRSADGCCICRAKSSSSRFTASRKYEKESTLCFNLQE--PRNGEICNACVLLVKRYKRLPVGSKRHWGHVVD 79 
XP_011142672   2 FNFHKPKVYRSATGCCICKAKSSSSRFTDSKKYEDDFLECFQLQE--RRTGEICNACVLLVKRWKKLPAGSNRNWRHVVD 79 
XP_011065489   2 FSFHKPKVYRSSTGCCICKAKSSSSRFTDSKKYEDDFMLCFQLDE--RRSGEICNACVLLVKRFKKLPPGNDRNWRHVVD 79 
XP_008190508   2 FSFHRPKVYRSSTGCCICKAKSSSSRFTDSKKYEEDFMKCFKLAE--PRQGEICNACVLLVKRWKKLPAGSDRNWKHVVD 79 
XP_002431945   2 FSFHKPKVYRSTTGCCICKAKSSSSRFTDSRKYEEDLMECFQLGE--RRTGEICNACVLLVKRWKKLPDGSDRNWRHVVD 79 
XP_040060555   2 FGFHKSKIYRSNDGCCICKTKSSSSRFTDSSRYEETFELCFGLSE--DRVGDICNACVLLVKRWKKLPNGSKKNWNHVVD 79 
XP_014340328   2 FGFHKSKIYRSLEGCCICKTKSSSSRFTDSRRYEESFRLCFGLLE--QRTGDICNACVLLVKRWKKLPVGSKKNWSHVVD 79 
EDO35710       2 FPSHRPKIFRSRLGCCICKAKSSSSRFTSSAKYEHHFEGCFALTE--KRQGEICNACVLLVKRWSKLPPGTEKNWKHVKL 79 
EEC04885       2 FSFHKPKIYRSALGCCICRAKSSSSRFTDSKKYEPEFARCFRIVEedRRSGEICNACVLLVKRWKKLPPGTTRDWHHVVD 81 
XP_015781912   2 FSFHKPKIYRSISGCCICKAKSSSSRFTDSKKYEAEFEKCFRISE--KRSGEICNACVLLVKRWKKLPPGTARNWRHVVD 79 
EDV99927      80 AR-AGPGTK----SLAKQKKRdseieaksgggggsgsgSFIPEKFAKIFKKNRKGKITAVAAPPTvdseq----qqqrSS 150
XP_011142672  80 AR-AGPGIK----SLTKYKSRnkk------------kvKDKPEKIEKIVKKKYVYSK---------------------TE 121
XP_011065489  80 AR-AGPGIK----SLTKFKAKnkr------------kvKDIS---DKLAKKKHVYVK---------------------TE 118
XP_008190508  80 AR-AGPGMK----SMSKFKSKn----------------KKIDENCDKIKKKKHFer------------------------ 114
XP_002431945  80 AR-AGPGTK----SLAKFKAK------------------------NKNKKKPKL------------------------KA 106
XP_040060555  80 AR-AGPGFKm--tKPKKMKNS-----------------------DGKKKSKLKKLHKLKRQNSDA-------------HS 120
XP_014340328  80 AR--GPGFKv--tKLKKIKSI----------------------SDKRRKIKPKILQKLRRQNSDA-------------HS 120
EDO35710      80 STiTKGSLEkeekSIRDFKNR---------------------NDFRKKLSLNHE------------------------IS 114
EEC04885      82 AR-AGPGTK----CVNKGKVK-------------------PPKRPLKKHRRRHRLGADKRCKMDIgggalsddvtgrwAP 137
XP_015781912  80 AR-AGPGTK----SMKYAKLNhsn------------ssPLTSSTNAKKHQKPKKLKSSLIDFSDIqgd-------nfhVP 135
EDV99927     151 SshesSPH-----------------------------LSDSNESYDDEQQqqqqqqqtgvcavvtpyqtrkrtaaaaqla 201
XP_011142672 122 AdrehSPAmsdelteyysiae----vgsksssrsespADSDDIAE----------------------------------- 162
XP_011065489 119 TdreqSPSmsddliedytla------dskassrsesiSDDDDDIGSND-------------------------------- 160
XP_008190508 115 ---eySPLsdnedvdmtevdflcedgpsggssrtaspRDSDSEENVVKNR------------------------------ 161
XP_002431945 107 EvreiSPApsdelssdlsg-------lsvnssrpcspVQSEECIPKASRKrp---------------------------- 151
XP_040060555 121 TtssvSPAqsp------------------------sySNQSDDGSDIESK------------------------------ 146
XP_014340328 121 TtssaSPSqsp------------------------cySNHSDEGSDTEAQ------------------------------ 146
EDO35710     115 EeyanSNSssn------------------------nnNNNSNNKDVTQVT------------------------------ 140
EEC04885     138 PclmpKPRdg---------------------------------------------------------------------- 147
XP_015781912 136 SrripSPIqsd------------------------ssDLDGDSDEDDYLSdlddegkeqgaegafnspkkklr------- 184
EDV99927     202 sacknkngssssssvaqrrlkltgsKRRRMLE-PQKHRRSIDNVPFFEEHDLLRLQVCCGIVFQSLslgSACYIIDPELY 280
XP_011142672 163 -------------------------KQIDVPPvENMEVEQSYINDFIDLSYFKREIICCGTIFKGP---YGEVIVDPSLL 214
XP_011065489 161 -------------------------KQLDL----VQDQDMNEDNDFLDLSYYKREIICCGSIFRGA---NGEIIMYPSSL 208
XP_008190508 162 -------------------------RHKGQAK-RRDGSSLPDLSDFICPEYWKREAICCGTIFRGM---CGEIIVDNRFL 212
XP_002431945 152 -----------------------ksPLHLKED-KHRRSHSPVSSGFVDLDFWKKKKVCCGTIFTGP---HGMVMVDPRLL 204
XP_040060555 147 -----------------------------------QRRPTPSIFSFLDRSYWKRQKVCCGIVYKGR---FGEVIIDPRLF 188
XP_014340328 147 -----------------------------------KSRSTAPVLSFLDPTYWKRQKICCGIIYKGR---FGEVIINPQLF 188
EDO35710     141 -------------------------STGCQTSfLFPTLSSSTKLPYIDLSLWRREEICCGTIFRGP---HGEVLVDPKLL 192
EEC04885     148 ----------------------------yLLG-RRAKSAPFRISSFLDMSFWRKEKVCCGIIFKGP---HGEVLIYPKLL 195
XP_015781912 185 ---ssskspisngllspssssstsrRNLAKRT-KPPTSSLSKVSSFLDMSFWRKEKICCGIIFKGP---NNELLIYPKLL 257
EDV99927     281 KP-CDKH 286
XP_011142672 215 KP-CVGC 220
XP_011065489 209 KP-CVNL 214
XP_008190508 213 KA-CSAR 218
XP_002431945 205 KP-CQGC 210
XP_040060555 189 KP-CCSS 194
XP_014340328 189 KP-CCSV 194
EDO35710     193 KPlC--- 196
EEC04885     196 RP-CRCR 201
XP_015781912 258 KP-CSCR 263
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