Conserved Protein Domain Family
GCOM2

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pfam15328: GCOM2 (This model is not part of the current CDD release)
Putative GRINL1B complex locus protein 2
This protein family is named Putative GRINL1B complex locus protein 2. GRINL1B is short for: glutamate receptor, ionotropic, N-methyl D-aspartate-like 1B. The name indicates what sort of receptor it is thought to be, a ligand gated ion channel specific to the neurotransmitter Glutamate. This family of proteins is found in eukaryotes. Proteins in this family are typically between 325 and 463 amino acids in length. The protein is thought to be the product of a pseudogene with a role in helping assemble a gene transcription unit.
Statistics
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PSSM-Id: 521782
Aligned: 30 rows
Threshold Bit Score: 129.501
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_012657417  27 MLKRQERLLRNEKFICKLPDKGKKILDSVAKLKAAIAEHEeVRGKSKLFHPVSIDCKLRQKAVA---------------- 90 
EGI69710      26 LLERQKKILANKKFISKLPDKGEKIINFYNKIQKELEHRNeVEEAANVLSRLNIASEGKMAMSKlewtgkynerddenmt 105
EDS29103      41 LKLRQELLLNNKGRVAKLPDKGAKIRLFYEQIVKQLEAHCnVDRAAELFSELNIASVGKRSLTKlewsgql---gggred 117
XP_001996266  34 IKDRQSHLLASKNRLQMLPDKGRRIRESYEKLLAEIHSRDeVEATAKLLGELNIASKGKITLNNlewqgrts-dpdsnas 112
XP_001999387  34 MRDRQSNILASKKRLESLPDKGRRIRESHEKLLAEIQRRNdVEATANLLGELNIASKGKVTLNNlewhgkts-pgksdvt 112
XP_002054606  34 IKDRQSNLLASKKRLQSLPDKGKRIQESYEKLLAEIQRRNdVEATANLFGELNIASKGKRTLNNlewhgraa-vdssnls 112
XP_002072817  40 MKERQGKFLTFKKRLDQLPDKGRRLKESYDKLLDEITRRDdVEAAARMLSELNIASKGRVALDNlewngkm---tddhva 116
XP_002019878  38 IRDRQSKFLSFKKRLLQLPDKGRRLQESYDKLLDEIRRRDdVEATAQMLSELNIASKGKIALNNlewngreivdegahve 117
XP_032577092  38 IKDRQSHFLSFKKRLHQLPDKGKRLQESYDKLLAEIRRRDeVEEATRMLSGLNIVEKGKIALNNlewngrnt-degahvd 116
XP_001954838  38 MRDRQAHFLSFKKRLLQLPDKGKRLQESYDKLLDEIRKRDeVEQATRLLSGLNIAEKGKVALSNlewngrta-degahvd 116
XP_012657417  91 -EvdVNADKAQNSDQILDTSSLV---PGSSSVDNIKSSQTTSQKQELGHPTHRGDEETPEA------ECTVNECpASRnT 160
EGI69710     106 kIidLDSDDEE--DPLKILAQPTgtgVHKKKIIHMVPEENLIKPEDIAEIETFKTD------------------------ 159
EDS29103     118 dG--VDSDDEEETDPLKILAQST---HTEKVVLVAKPEPSLITEQDLKDIEELKQEQQVE-------------------- 172
XP_001996266 113 dL--LDSDDEQEMDPLRVIAQGS---LHQRQVKILPPHATLITHEDLAEIESFR----LDSldsfrtDQSASSScSGQaD 183
XP_001999387 113 dL--LDSDDEQDIDPLRIIAQGT---MHQRQVKVLPPPATLITPEDVVDIASFRQEQPSDSldssqtNESASS--SGQ-D 184
XP_002054606 113 dL--LDSDDEQEMDPLRVIAQGT---MHQRQVKVLPPPATLITPEDVADIASFRQT--PNSldstltDQSASSSlSGQ-E 184
XP_002072817 117 dI--LDSDDELEMDPLKIIAQGT---MHEKKVKVLPAEVTLITAEDLAEIETFKGASTSPD------------------- 172
XP_002019878 118 dI--LDSDDEL--DPLRIIAQGT---MHEKRVKVLPPPESLITAGDLADINTFKKT--ADSpdsaleGQSATS------- 181
XP_032577092 117 dI--LDSDDEVEMDPLRIIAQGT---MHEKKVKVIPPPTSLITADDLADIEEFKKP--TDSpdsalaGHSDTS------- 182
XP_001954838 117 dI--LDSDDELEMDPLKIIAQGT---MHEKKVKVIPPSASLITAEDLAEIEDFKKP--TDSpdsalhDHSDTS------- 182
XP_012657417 161 ARVPSSSAASEHFPGHCVSRQAEDNFSSSD-------SLFIDKFQRITIEDQGEHNSEENTSAENLTglsglcsgtqkKP 233
EGI69710     160 --------------------------------------LLDTEHVKYIVDKVE---KVQEVKKREPF-----------KP 187
EDS29103     173 ---CAPAELIEVD----VAKSVGKLSSILEkrqqavvNELYDGHAIYICNKER------STAQKSKY-----------LP 228
XP_001996266 184 GSNAVAAEIIEIDVVTLVGKPPATM---------------LEQHALYLIEKTE---LQATATEREKF-----------KP 234
XP_001999387 185 DSKIIPAEIIEIDVGKLVGNRPTEAT--------------LEQHALYLIDKTE---LH-AVKDREKF-----------LP 235
XP_002054606 185 CSKTIPAEIIEIDAATLVDKHSPGTT--------------LEQHALYLIEKTE---LPVSATAREKF-----------RP 236
XP_002072817 173 --STVPADLIEVKLSRLALTKESNDSAPAP-------TLPLEQHALYLIDKTEHQRSDNDPPVREKF-----------KP 232
XP_002019878 182 ---SIPAEFVELDACLVAAKYPQESRS----------YPPVDQHSLYLIDITE---PKERSAGREKF-----------RP 234
XP_032577092 183 ---SLPAEIVEIDASQVAAKLSKEL--------------PPDQHALYLIDKTE---TNVNTP-REKF-----------MP 230
XP_001954838 183 ---SLPAEIIEVDASIVAAKLGKEE--------------PLEQHARYLIDKTE---VNINPSAREKF-----------KP 231
XP_012657417 234 HymevlemRAKN 245
EGI69710     188 Y-------KTTK 192
EDS29103     229 F-------RTTK 233
XP_001996266 235 F-------RTTV 239
XP_001999387 236 F-------RTTV 240
XP_002054606 237 F-------RTTI 241
XP_002072817 233 F-------RTTV 237
XP_002019878 235 F-------RTTI 239
XP_032577092 231 F-------RTTK 235
XP_001954838 232 F-------RTTV 236
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