Conserved Protein Domain Family
Raftlin

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pfam15250: Raftlin (This model is not part of the current CDD release)
Raftlin
This family of proteins plays a role in the formation and/or maintenance of lipid rafts.
Statistics
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PSSM-Id: 521729
Aligned: 13 rows
Threshold Bit Score: 703.439
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_028926605   1 MGCGLNKFEKRDEKRPGNIYSTLKRPQVETKIDVSYEYRFLEFTTLNNAELPRSSAARLSSWRDLPAQLQELYQQGFALA 80 
Q6A0D4         1 MGCSLNKLEKREEKRPGNIYSTLKRPQVETKVDVTYEYCFLEFTTLTAAELPRSSATRLASLRDLPDQLLELYQQGFSLA 80  house mouse
XP_003463410   1 MGCGLRKLSDPEDSSPGKIFSTLKRPQVETKTDTAYEYLLLDFCL---QALPHPEVIRIHSVTDIPAQVEAYYLQGYVVG 77 
XP_343572      1 MGCGLRKLEDPDESSPGKIFSTLKRPQVETKTEFAYEYALLDFTL---QASTNPEVIKINSVLDIVAKVEDYYLKGYVVG 77 
XP_005989569   1 MGCGLRKLEDPDDSSPGKIFSTLKRPQVETKTDIAYEYVLLDFTL---EGSSKADVININSLLDIPSKVEEYYRKGYVVV 77 
1_pfamImport   1 MGCGLRKLDDPEDSSPGKIFSTLKRPQVETKTEVAYEYVLLDFTL---QASPNPEVIKISSIPDIVTKVDEYYRNGYVVG 77 
XP_003222216   1 MGCGLNKLEKHDEKRPGNIYSTLKRPQVETKIDIFYEYRFLEFTTLSDAELPGSSAIRLSSLRDLPAQLQELYQQGFILA 80 
XP_007505190   1 MGCRLNKLEKRDEKRPGNIYSTLKRPQVETKIDVAYEYRFLEFTTLTDVELPRSSAVRLSSLRDLPTQLQELYQQGFTLV 80 
3_pfamImport   1 MGCRLNKLEKRDDRRPGNIYSTLKRPQVETKIDVSYEYRFLEFTTLSAAELPRASAVRLASLRDLPTQLLELYQQGFSLA 80 
XP_018879302   1 MGCGLNKLEKRDEKRPGNIYSTLKRPQVETKIDVSYEYRFLEFTTLSAAELPGSSAVRLASLRDLPAQLLELYQQGFSLA 80 
XP_014440582   1 MGCGLNKLEKRSEKRPGNIYSTLKRPQVETKVDVAYEYRFLDFTTLSTAELPRSSAVRLSSLRDLPAQLLELYQQGFSLA 80 
XP_002716228   1 MGCGLNKLEKRDEKRPGNIYSTLKRPQVETKIDVAYEYRFLEFTTLSAAALPQSSAVRLASLRDLPAQLLGLYEQGFSLA 80 
Q52LD8         1 MGCGLRKLEDPDDSSPGKIFSTLKRPQVETKTEFAYEYVLLDFTL---QASSNPEVIKINSILDIVTKVENYYLKGYIVG 77  human
XP_028926605  81 ALHPFVQPTNEREKTPQEQIFRAVLIKKTERS--QKTDYHNEGYILELECCSSLDHLAGQKIIPDFIKKIQDAASRGLKF 158
Q6A0D4        81 ALHPFVQPTRRQEKILLEHIFRAILVKKTNRS--QKAELHDEGYTLELDYCSSLEHLADQKLIPEFIKKVQEAASQGLKF 158 house mouse
XP_003463410  78 ALHPILHPAGPRAPLPASHLYRAVLLRPRASPkqQAVPSTQRCQRLVIEECPVPGDAQTSDIAKELMEKVNAAARAGMRF 157
XP_343572     78 AIHPVIQPVGQRKHLPASHLYRAVLSRVKLSSk-HSAAGGQRRARLVIEECPLTCETQGNDSAKELIDKVNAAAKRGMRF 156
XP_005989569  78 AIHPTILSVGRRRHLPVSYLYRAVLSRPKPSQk-HTAHGGQRHPRLVIEEWPLKYETLTNEIVKGLLEKVNETTKRGIKF 156
1_pfamImport  78 AVHPVLQPVRQRRPLPASHLYRVVLWRLKLSPklSAAPSGQRRPRLVIEECPLMYETQANDVAKELIEKINEASKRGRRF 157
XP_003222216  81 AVHPFVQPTNENEKTPQEQIFRAVLIKKTERS--LKNDVIGDGNALEIESCFSSDHLLDKSKMPDLIKKIQDAASRGLRF 158
XP_007505190  81 ALHPFVQPTDEREKTPQEQIFRAVLIKKTERS--QKNDFHNDGYILELDCCSSLDHPTDQKIIPNFIKKIQDTASRGLEF 158
3_pfamImport  81 ALHPFVQPTSEREKTPLEHIFRAILIKKTDRS--QNADLHNEGYILELDCCSSLDHLTDQKILPEFIKKIQEAASRGLKF 158
XP_018879302  81 ALHPFVQPTHEREKTPLEHIFRAILIKKTDRS--QKTDLHNEGYVLELDCCSSSDHLPDQKLIPEFIKKIQEAASQGLKF 158
XP_014440582  81 ALHPFVQPTHEWEKTPLQHIFRAILIKKTDRS--QKTDVPNDGYVLELDCCSSLDHLTDQKIIPEFIKKVQEAASQGLKF 158
XP_002716228  81 ALHPFVQPTHGLERTPLEHIFRAILIKKTDRS--QKSDVYNEGYILELDCCSSLDHLSDQKIIPEFIKKVQEAASQGLKF 158
Q52LD8        78 AIHPVIQPVGQRKHLPASYLYRVVLLRLKLSPknSAAPSGQRRPRLVIEECPLTSEAQTNDAAKELIEKINVAAKRGMKF 157 human
XP_028926605 159 VGVIPHYSSQVKTTDGGVVT---IPGNNSV-ETRDEENGSGLcedRASLGNGNSGATHSLPLGdppalrdADTQRHPETS 234
Q6A0D4       159 VSVVPQYQPSVSSAGSRRLK---PVANSVE-DARDVKCTLGD---RSSLENDTPKAAETDAAT-------AGVNRRPETK 224 house mouse
XP_003463410 158 IGFVPQLCPPPRCCNGTETG---QGVGMEP----ADAGARPGsddSWRSTDKRPGSGSGPVLE-------GGTGEEPHQE 223
XP_343572    157 VGFVPQHCSPSKHCNGASQ----DGVAESE------LHKRQGsqdNCKSLND--GTL----WE-------SGVEEEPQPE 213
XP_005989569 157 VGFISQHGIQSRTCNGANPLtetDGDLETAvYAKMQELKKCNpdeHCRNMLE--GTLSGQSSE-------TGTEEEVHME 227
1_pfamImport 158 VGLLAQHSAP--FCNGTDL----NGDGEPA------LPGRHScedHGRSWSE--GPLSGQPSE-------SGAEGELHPQ 216
XP_003222216 159 VGIIPQYDSQMNSKSSSAIT---STSSSSR-ELKGDKNPSEFpedCGSPDHDRADCTNGYSVSea---reDDAEQCVDSI 231
XP_007505190 159 VGVIPQYQCPGNSAGSSPLT---PTANGSG-ESRDEKNTLGSsedLLPLDRETPGSADICSTP-------AGSQGDAGLW 227
3_pfamImport 159 VGVVPQYRCPGSPVGSCPPA-----------DDRDETQEPGR-----HRAAEELGAADAA----------AGTDGSPEPG 212
XP_018879302 159 VGVIPQYHSSVNSAGSSAPV---STANSTE-DARDAKNARGD---HASLENEKPGTGDACSAP-------AGRNQSPEPS 224
XP_014440582 159 VGVIPQYHSPPGSPASCE---------------ADARGGRGTqegPRSLENEDLGAPDTCDAP-------AERHQSP--- 213
XP_002716228 159 VGVIPQYHSSPSPAGGSPTV---PTAPTAH-SSAGAGDAKSArgtPTSLEQESPGAPVGKEQS-------LEPGGGPAEQ 227
Q52LD8       158 VGFISQHYSPSKFCNGTNH----DGDIESM------LHVRHGsdeNCRSWNE--GTLSGQSSE-------SGIEEELHHE 218 human
XP_028926605 235 eEQREKGPAAEQLSL--PSGVGDGEEFQdk---sL--SvsqdlrktpdkregdmsgmcaePLAGKLELFTIFNKPKS-QQ 306
Q6A0D4       225 pGSTGDVPSAQQPGIpsPSAENEAGEFP------L--Rglqpaldrse---gdpsngpeeLPSRKMEIFAFFNRPKS-QQ 292 house mouse
XP_003463410 224 ---------GSRAQ-----GEPEGSPSPtkprkgE--D---------------------------PRLYAAFNAFED-DA 259
XP_343572    214 ---------SGQHQ-----TEGNSSLSYsnpkrgE--A-------------------------PDNKVYMVFNAFEE-DS 251
XP_005989569 228 ---------NEQHQAadCRQRREGSPQPgr---rE--D---------------------------MRLFAVFN-ISD-DL 264
1_pfamImport 217 ---------SGPCQ-----REPHGSPRSseatrgE--E----------------------CLSSDNKLYIVFNVFDD-ES 257
XP_003222216 232 eDPGGEGQVTEHLSL--SSVGENGGHLQ------------------------------------EIEIFAAFNKPKT-SQ 272
XP_007505190 228 eNGGADGQRAEPLNL--STIQGNGGGSPek---eD--Essarl------------tstadTLAGKMEIFTIFNKPKSqQQ 288
3_pfamImport 213 qGPRGGTPAAQQPGS--SLGEGDGAESPargtpegpda-------------dplsegpgePLAAKMEIFALFNKPKS-PQ 276
XP_018879302 225 sGPRGEVPLAKQPSS--PSGEGDGGELS------P--Qgvsktldgle---sdplevheePLSGKMEIFTLFNKPKS-HQ 290
XP_014440582 214 -GPGGEAPVAEQPSL--PSGEGDGGEFS------P--Grgsttldvpd---gtpaavrgqPLPGKMEILALFNKPKS-HQ 278
XP_002716228 228 lSPAEGVNQARDAP------DDDLSEVP------A--E----------------------PAPGRMEIFALFNKPQS-HR 270
Q52LD8       219 ---------SGQYQ-----MEQNGSPTSsksrkgEasD---------------------------NKLYTVFNAFDD-DS 256 human
XP_028926605 307 KCRQYYTVSIPLRVSKNGQTVSSLDANWLEHMSDHFRKGGVLVNAVFYLGMVN-DSFHGLTDGVFIFEDVSTEESKTI-Q 384
Q6A0D4       293 KCRQYYPVTIPLQVSKNGQTVSSLDASWLEHMSDHFRKGGVLVNAVFQLGMAN-DSFYGLTDGVFIFEAVSTEDNRTT-Q 370 house mouse
XP_003463410 260 GCWSYQEGALSMKVTRKGAVVSSLDADWLELTTFYYKQGFSLTDAFVCWDPPRgDPLPKSLEGFFIYEEEGSGVPGAPrR 339
XP_343572    252 ACWTYQEGILSMKVTRKGAVISTLDANWLELTTFYYKQGLSLVDSFVCWETPKgDQLPKSLEGFFIYEEEGSGVPGSNrR 331
XP_005989569 265 TCQSYHEGSLSMKVTRKGHTISTLEADWLELTTCYYKQGLSLVDSFVHWETIKgDHSPKSLEGLFIYEEESSGVSRSNrK 344
1_pfamImport 258 TGWTYQEGILSMKVTRKGPVISTLDADWLELTTFYYKQGLSLIDSFVCWETPRgDHVPKALDGFFIYEEEGSGVPGSSrT 337
XP_003222216 273 RSAQYYSVTIPVRIISNGQSICSLEANWLEHMTDHFRKGSILVNAIFSLGILN-DSFQGMADGLFIFEDLSVDDSKNI-Q 350
XP_007505190 289 RCRQYYTVTIPLRVSKNGRTVNSLDANWLEHMSDHFRKGGVLVNAIFYLGMVN-DSFHSLTDGVFIFEDVSPEENKSV-Q 366
3_pfamImport 277 KRRQYYPVTVPLRVSKNGPTVSGLDANWLEHMSDHFRKGGVLVNAVSSLPQVA-DSLHDLTDGVFIFEAVSTEDSRAT-Q 354
XP_018879302 291 KCRQYYPVTIPLRVSKNGQTVSGLDANWLEHMSDHFRKGGMLVNAVFYLGIVN-DSLHGLTDGVFIFEAVSTEDSKTI-Q 368
XP_014440582 279 KYRQYYPVTIPLRISKNGQTVSGLDANWLEHMSDHFRKGGMLVNAVFYLGMVN-DSLHGLTDGVFIFEAISTEDEKTI-Q 356
XP_002716228 271 PCRQYYPITIPLRVSRNGQTVSSLDANWLEHMSSHFRKGGALVNAVFYLGAGT-DSLHGLTEGVFIFEAVSTEDSKTG-Q 348
Q52LD8       257 TSWAYQEGILSMKVTRKGSVISTLDADWLELTTFYYKQGLSLIDSFVFWETSKgEHLPKSLEGFFIYEEEGSGVPGSSrK 336 human
XP_028926605 385 GYDAIVVEQWTVLEGVEVQTDYIPLLNSLAAYGWQLTCVLPTPIVTTNREGNLATKQIVFLQRPSLPQK--AKKKESKFQ 462
Q6A0D4       371 GYDAIVVEQWTVLEGTEVQTDYMPLLNSLAAYGWQLTCVLPTPILKTTREGNVSTKQIVFLQRPCLPQK--TKKRESKFQ 448 house mouse
XP_003463410 340 GHDAIVVEQWTVIEGASVKADYGPLLHTLAEFGWLLTSVLPTPVLRQDRDGNLATKQVVFLQRPALRSS--VARSLE-GE 416
XP_343572    332 GNDAIVVEQWTVIEGCEIKTDYGPLLHTLAEFGWLLTSVLPTPILRHDSEGNLATKQVVFLQRPVTWNS--AAQTPERKG 409
XP_005989569 345 GNDSIVVEQWTVIEGCDVKTDYGPLLHTLAEFGWLLTCVLPTPIIRHDSEGNLATKQVVFLQRPVMFNTdlLMDKTEKKS 424
1_pfamImport 338 GNDAIVVEQWTVIEGCEIKTDYAPLLHTLAEFGWLLTSVLPTPVLRHDSEGNLATKQVVFLQRPALWNS--AAQTPERKA 415
XP_003222216 351 GYDAIVVEQWTVLEGARVQADYIPLLNSLAMYGWQLTCVLPTPVVKTNSDGNLSTKQIVFLQRPFLPQK--TKKKQPKFH 428
XP_007505190 367 GYDAIVVEQWTVLEGVEVQTDYIPLLNSLAAYGWQLTCVLPTPIVKTNREGNVATKQIVFLQRPSLPQK--AKKRESKFQ 444
3_pfamImport 355 GYDAIVVEQWTVLDGVEVQTDYVPLL------GWQLTCVLPTPVVRTTRRGSAHSPQDVFRLRALSASR--QKSYLGKFQ 426
XP_018879302 369 GYDAIVVEQWTVLEGVEVQTDYVPLLNSLAAYGWQLTCVLPTPVVKTTSEGSVSTKQIVFLQRPCLPQK--IKKKESKFQ 446
XP_014440582 357 GYDAIVVEQWTVLDGAEVRTDYVPLLSSLAAYGWQLTCVLPTPVVRTTRDGSVSTKQVVFLQRPCLPQK--SKKKDSKFQ 434
XP_002716228 349 GYDAIVVEQWTVLEGVEVQTDYVPLLNSLAAYGWQLTCVLPTPVIKTTREGSVSTKQIVFLQRPCLPQK--IKKKESKFQ 426
Q52LD8       337 GNDAIVVEQWTVIEGCEIKTDYGPLLHTLAEFGWLLTSVLPTPVLRHDSEGNLATKQIVFLQRPVMWNS--AAQTPDKKA 414 human
XP_028926605 463 WRFSREDMHSRQAKKS-KAKLSTREK 487
Q6A0D4       449 WRFSRNEIHGRQTRKS-KGKLSASNK 473 house mouse
XP_003463410 417 GRILRGENQNQACSGSpGSKGCTQPP 442
XP_343572    410 GRLLRGEDRNKVGSRSiGLDTSECQP 435
XP_005989569 425 TKQVKSDEKSNPSNRSvGVDSNNCIH 450
1_pfamImport 416 SRHVKGEDRHRVGSRSiGLDTATSPP 441
XP_003222216 429 WRFSKEDRRRKQAKKSlKARLSAREQ 454
XP_007505190 445 WRFSREDVHSRQLRKS-KSKRGAREK 469
3_pfamImport 427 WRFSRDEMRNRP-RKS-RGKLRARSK 450
XP_018879302 447 WRFSREEMHNRQMRKS-KGKLSARDK 471
XP_014440582 435 WRFSREEVRSRRARKS-KGQLGARDA 459
XP_002716228 427 WRFSRDEGHGRQLRRS-KGRLGTKDK 451
Q52LD8       415 SRHIKGEDKNKATSRSiGLDTTSSQP 440 human
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