Conserved Protein Domain Family
TMEM220

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pfam15071: TMEM220 (This model is not part of the current CDD release)
Transmembrane family 220, helix
Transmembrane 220 (TMEM220) is a domain of unknown function. It is thought to be a transmembrane helix. The length of this protein is typically between 150 and 160 amino acids. In humans, it is found in the chromosomal position 17p13.1.
Statistics
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PSSM-Id: 521640
Aligned: 39 rows
Threshold Bit Score: 47.676
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013407070  11 LYVLCAIVQYNDPDPLVWILAYL-LPAYLCF-YRSKGKG--DATLYLALGLLYVLWAInqfpPQWEGLMFENL-----SM 81  Leadbetterella ...
XP_004989590  19 FFAACGWAQVNDPDPERWVTFYV-VCGSVTAlVWAATAAeaTGSTAAALGRLLSLASLvl-sSMVTAVLANDVllvleKD 96 
NP_001315028  23 FFSLATYVQINDPDAALWMVGYA-IPAVLCF-LIFCQQQitESLLWRRIADLHVLVAStf-gVILAWKLYKEGit----- 94 
2_pfamImport   1 FFALASYVQINDPDAGLWMAGYG-VPAVLCA-CIVVKPHvtETLPWRRVADLHVMISSai-sAMLGWTLYKERit----- 72 
1_pfamImport   1 FFTLAAPVRLT---AAMPRVFFCpPPHPGCL-LPAETLA------WRRVADLHVMISCav-vSMLGWRLFTEK-----VS 64 
3_pfamImport   1 FLSLATYVQMNDPDAGVWMAAYG-VPAVLSG-LVGLDPHvtETLPWRRTSDLHVMLSVav-vAMLGWRLDRERlw----- 72 
XP_003731360  23 FFSLASYVQHNDPDAGIWMVAYG-IPAFLCV-AQCVRPSisDNVLWRYMTAFHLVLCAcg-eGYILSHIYLTSgaagk-- 97 
XP_014320698  22 FFALAALVQVNDPDAELWVVAYM-IPAVLTL-LVGLNPLvtGNLIWKSVSAVQVFFCVvw-aASLAYHLMLHAqw----- 93 
XP_011225743  23 FFALAALVQVNDPDAEIWMVVYL-MPAVLSL-LVGLNPLvtGNFIWKSVSAIHILLCMaw-aGSLAGHLWLHS-----QQ 94 
XP_030855482  33 FFTLAGLVQVNDQDPYVWMPVYL-VPALLCF-SIVWNADivEKSWWRLIAIVHLIGCLic-tCVLGGTVIHYMedrl--- 106
WP_013407070  82 KT----------------------INVELGRESLGLGLCAIGMFLCAI 107 Leadbetterella byssophila
XP_004989590  97 EDgavarlpplltatglaqwfwhvLELEEGREVIGVLLLVIHNLLLVF 144
NP_001315028  95 ----------------------diFQQEEGRECCGLLLTVFWLLLCRH 120
2_pfamImport  73 ----------------------qiFQKEEGREFSGLVLTAFWLLLCRH 98 
1_pfamImport  65 AI----------------------FQQEEGRECSGLMLTGVWLLLCRH 90 
3_pfamImport  73 ----------------------eiFHQEEGREFSGLLLTTVWLLLCRH 98 
XP_003731360  98 -------------------haqqwFEMEEAREFAGLFLVCVWLTLCFL 126
XP_014320698  94 ----------------------nvLHEEEGRELFGLVIIAAWMGLCHS 119
XP_011225743  95 NI----------------------LHEEEGRELFGLVIITVWMGLCHS 120
XP_030855482 107 ---------------------mnpLRYEEGRELSGVLIVDVWLIICLC 133
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