Conserved Protein Domain Family
Rootletin

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pfam15035: Rootletin (This model is not part of the current CDD release)
Ciliary rootlet component, centrosome cohesion
Statistics
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PSSM-Id: 521617
Aligned: 24 rows
Threshold Bit Score: 72.4158
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EDW43432       108 RRRLDTYKQAQHNQAnlVSRLQSK--------------IQQYRQRCSDleDRMHEtikptagtgpklttgptnqvlcsts 173 
XP_053588872    96 NSSALIHSSRTPNYA--MSSLRNRhkslggnryrsispLGDYGRHRSS--PRVLA------------------------- 146 
3_pfamImport     1 RQRIDNNVEQQKEYSemMAALQNK--------------VHEYRKHIAEleGRMVGtrnrmlddpssnvlifdnydpgnty 66  
4_pfamImport     1 DRRLDTYKLAQQRQAvlVSRLQAK--------------VMQYRERCSEleREMRTsipaidnvrs--------------- 51  
2_pfamImport     1 KKRIDAYRQAQQHQAelVSRLQAK--------------VYQYKKRCSEleSQMAEslpaeedrlltgslpgq-------- 58  
6_pfamImport     1 KRRLDTYRQAQQHQAalVSRLQAK--------------VLQYKQRCSEleNQMAEtvpcdttkptaataavss------- 59  
EEZ97966       137 RRRLDAYRQAQADQAalVSRLQAK--------------VLQYKQRCADleAQMVEnprqptlpspstal----------- 191 
XP_002428341    19 KKRLESYKQAQQHQAalVSRLQAK--------------ILQYKQRCADleDQVDAkgvvkdssnhlvssi---------- 74  
12_pfamImport    1 RRRLETYKQAQQQQAalVSRLQAK--------------VLQYKQRCSEleGQMEEvldrppvvappgsal---------- 56  
XP_020304987    75 KRRIDANAEQQREHAdiMAALQRK--------------IEQYRQRFAEieGRITVrelndpddltsmkl----------- 129  African eye ...
EDW43432       174 ---------------------------------------------ltlgqsslpcsssldspppscsrdyVDDVlvtgg- 207 
XP_053588872   147 ----------------------------------------------------------------------HYNLdgaefg 156 
3_pfamImport    67 itnhnvemwspargkrdtllgggpgglttvnvltgsggaggytsalgshgltgsgvagygggvqalagdpNANY------ 140 
4_pfamImport    52 -------------------------------------------------------------yrdsvrdyqSMDL------ 64  
2_pfamImport    59 -----------------------------------------------------lilqaahqtmremreeqIEDL------ 79  
6_pfamImport    60 ----------------------------------------------------tsaleaahqtlrdireeqIHDL------ 81  
EEZ97966       192 --------------------------------------------------------eqaqqhlrevreerIADL------ 209 
XP_002428341    75 --------------------------------------------------------hslpppapelndsnL-DL------ 91  
12_pfamImport   57 --------------------------------------------------------eaaqlqlrelreerVSDL------ 74  
XP_020304987   130 --------------------------------------------------------keewllspkfkmqeIGDA------ 147  African eye ...
EDW43432       208 -gagaAELCRKLEEEHQRCEQILAQNSALRQQLEESNRTNEALTNDLQKLTNDWAGLRDELLIKEDEFKEEEQAFKDYYN 286 
XP_053588872   157 geenmDEIFTKLKEELFRNNTLEEVNEMLREENDAALAANEHLRVDATNLSKELQQLQQQQHTESMRFRSENTRYRNQME 236 
3_pfamImport   141 ------EMIAKLDEERRRADE-------YRMQWENERQKSLALEDENDRLRREFERYATDSRDKEKTFINRERNLAQYLS 207 
4_pfamImport    65 -----DSAIRALEQERAKSEKVMELNSTLREQLDDAQTSNETLSTDLQKLTSDWEKMRDEMNAKEDEWKEEEQMFNEYCS 139 
2_pfamImport    80 -----DTALKKLAEERNRCEKLLQLNVSLKEQLEESHRTNDALTSDLQKISSEWDALREEMSTKEEEWKEEEMAFNEYYN 154 
6_pfamImport    82 -----DTALQKLGEERRKCEELLQLNSSLKDQLEESHQTNEALTTDLQKLSNDWDILREELAIKEDEWKEEEQAFNEYYI 156 
EEZ97966       210 -----DTALRRLDEEKRRNDKLVQLNATLREQLEESHSTNESLTSDLQKLTNEFENLREEMIIKEDEWKDEEQAFNDYYS 284 
XP_002428341    92 -----NTAIRYLEEERRKNEKLRQMYINAKEQLEEAQQNNESLTNDLQKITNEWESLREELLLKEDEWRDEEHAFNEYYT 166 
12_pfamImport   75 -----DTALRALHEEKRKTEKMAQINMTLRQQLEEAHESNEALTSDLQKLTSDWEVMREEMIIKEDEWKEEEQ------- 142 
XP_020304987   148 ------EFANQLEDERRRAED-------LAMQLQQERLQNDQLQAEIQRLRQQFE---ISIRDKERVYQTRERNLTRYLG 211  African eye ...
EDW43432       287 SEHNRLLKMWREVVAVKRSFKEMQTAMKAEVAKMGQEINCVG 328 
XP_053588872   237 TQHRKLISLWKEFSAVKRQLHELRTTTANDLDRQLTEFTRCA 278 
3_pfamImport   208 DEQRKMLDLWTELQRVRKQFSDLKSQTEDDLDKQKSEFTRAL 249 
4_pfamImport   140 LEHGRMMSLWQDVAQVKRMFTDMKSSTQQDLNKLRGELSLAS 181 
2_pfamImport   155 SEHNRLRNLWRDVHSVKRLFADMKFATERDLSKMRGEMSGLA 196 
6_pfamImport   157 SEHNRLLNLWRDVVSVKRLFAEMKSATERDLSKLRNEITSSS 198 
EEZ97966       285 TEHNRLLNLWRDVVAVKRFFMEIQSSTERDLNSIKSEVSYLG 326 
XP_002428341   167 AEHSRMLMLWRNVVCVKRTFAEVQMNTERDLNKLKQEYANML 208 
12_pfamImport  143 --HARLLSLWRDVVAMKRQFTEMQSATQRDLIKMKADFSNTT 182 
XP_020304987   212 DEQRKMMELWSELQRVRRQCSEYREQTERDLENQRNEFIKVI 253  African eye worm
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