6R99


Conserved Protein Domain Family
CLN5

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pfam15014: CLN5 (This model is not part of the current CDD release)
Ceroid-lipofuscinosis neuronal protein 5
Statistics
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PSSM-Id: 521602
Aligned: 7 rows
Threshold Bit Score: 535.545
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6R99_A       108 RFDFRPKPDPYCQA-KYTFCPTGSP---IPVXEGDDDIEVFRLQAPVWEFKYGDLLGHL-KIXHDAIGFRSTLTGKNYTX 182 human
1_pfamImport   1 RFDHRPTADSYCEA-LYPFCPTGDRdgrIPYMREDDVISVYRLQTPVWEFKYGDLLGKVqHIMHDAIGFSSSHTGANYTM 79 
XP_007251755  43 RFDRRPVTDPYCQA-LYPFCPTGDPdgrIPYMRDSDVISVFRLQTPVWEFKYGDLLGKF-HIMHDAIGFSSSETGRNYTM 120
XP_011441884  33 RYKSRPISNSYCKAgVIPFCPTGQIansMPKFKPDDKVQLYALKKPVWQFKFGDTLGKF-HIMHDALGISNLNTGMNYTM 111
XP_005668529  57 RFSFRPEPDPYCQA-KYTFCPTGSP---IPVMKDDDVIEVFRLQAPVWEFKYGDLLGHL-KIMHDAIGFRSTLTDKNYTM 131
XP_006639091  41 RFDHRPKPDPYCRA-LYTFCPTGLPdgtIPTMKDSDTIQVFRLQAPVWEFKYGDLLGKF-DIMHDAIGFRSTLTGRNYTM 118
XP_064412865  40 RFDHRPKPDPYCQA-LYPFCPTGSSdgsIPLMKEEDTIEVFRLQAPVWEFKYGDLLGHF-KIMHDAVGFRSSLTHRNYTM 117 coelacanth
6R99_A       183 EWYELFQLGNCTFPHLRPEXDAPFWCNQGAACFFEGIDDVHWKENGTLVQVATISgnxFNQXAKWVKQDNETGIYYETWN 262 human
1_pfamImport  80 EWYELFQLGNCTFPHLRQEAPAPFWCNQGAACFFEGIDDLHWSQNGTLEKIGEVT---FNHMAQWVQDDNRTGIYYETWT 156
XP_007251755 121 EWYELFQLGNCTFPHLRKDTAAPFWCNQGAACFYEGIDDEHWRQNGTLEKVGEMSgeqFNNLARWVQEDNETGIYYETWT 200
XP_011441884 112 EWYELFQLFNCTFPHVVND--SLLWCNQGAACIYGGIEDRLWKENGTLQLVATTNgdvFNQFAEWVLWDNTTGLYYETWT 189
XP_005668529 132 EWYELFQLGNCTFPHLRPEMNAPFWCNQGAACFFEGIDDNHWKENGTLVLVATISgnmFNKMAQWVKQDNETGIYYETWT 211
XP_006639091 119 EWYELFQLGNCTFPHLRPELSAPFWCNHGAACFYEGIDDLHWKQYGTLEKVAEITgtqFNKMSEWVKQDNETGIYYETWT 198
XP_064412865 118 EWYELFQLGNCTFPHLRPELETPFWCNQGAACFFEDIDDLHWKQNGSMIKVAEITgnvFNKMAKWVKEDNATGIYYETWT 197 coelacanth
6R99_A       263 VKASPEKGAETWFDSYDCSKFVLRTFNKLAEFGAEFKN-IETNYTRIFLYSGEPTYLGNETSVFGPTGNKTLGLAIKRFY 341 human
1_pfamImport 157 VRSDPAPNSTVWFESYDCSQFVHRTYRKLKELGAKLSSrSPTYYTKIYLYSGEPTYLGNDSAIFGTPALQNLAADIRKFY 236
XP_007251755 201 VRSDPGLNSTTWFESYDCSQFVHRTYRKIKELGAKLSSrSQTNYTKIYLYSGEPTYLGDDDSIFGQSSMKALATDIREFY 280
XP_011441884 190 VRDKP--DGKMWFDSFDCASWVLRAFQEFGKLGVKFDQtVKLNYTRINLFSDMPKYLGNQSMVF---ANKTLGNDIMKFY 264
XP_005668529 212 VQASPEKGAETWFESYDCSKFVLRTYEKLAELGAEFKk-TETNYTRIFLYSGEPTYLGNETSVFGPTGNKTLALAIKRFY 290
XP_006639091 199 VQADPSPNTTVWFESYDCSKFVHRTYRKLADMGVTLKStLQTNYTRIFLYSGQPSFLGNDTTIFGDGGVKSLASDIRSFF 278
XP_064412865 198 VEAAPSPNATVWFESYDCSRFVLRVYQKLAELGAAFNNkLQTNYTRIFLYSGEPTYLGNDTSIFGPRGNKTLASDIKAFY 277 coelacanth
6R99_A       342 YPFKPHLPTKEFLLSLLQIFDAVIVHKQFYLFYNFEYWFLPXKFPFIKITYEEIPLP 398 human
1_pfamImport 237 FTFRPHQSFVDFAFTLLEAYKKIVLDKTFYLYYNFEYWHLPMKYPYMQIVYEEVPLP 293
XP_007251755 281 HSFQPHQSMIQFILSLMEAYKKVVLEKTFYLYYNFEYWHLPMKAPYIQITYEEVPLP 337
XP_011441884 265 SKFQAHVAGPLLIEHLISALEEILIQNKFYFFYNEEYWFLPMKSPHVKLTYNEIPLP 321
XP_005668529 291 YPFKPHLSTKEFLLSLLQIFDAVIIHRQFYLFYNFEYWFLPMKFPFIKITYEEIPLP 347
XP_006639091 279 HSFQPHQSIKDFLLSLLEVYDRVVLEKSFYLYYNFEYWHLPMKPPYIRVTYEEIPLP 335
XP_064412865 278 YPFRPHQSLKEFLISLLEIYDEVILKKTFYLYYNFGYWLLPMKSPYIKILYEEIPLP 334 coelacanth
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