8BD7


Conserved Protein Domain Family
IFT20

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pfam14931: IFT20 (This model is not part of the current CDD release)
Intraflagellar transport complex B, subunit 20
IFT20 is subunit 20 of the intraflagellar transport complex B. The intraflagellar transport complex assembles and maintains eukaryotic cilia and flagella. IFT20 is localised to the Golgi complex and is anchored there by the Golgi polypeptide, GMAP210, whereas all other subunits except IFT172 localise to cilia and the peri-basal body or centrosomal region at the base of cilia. IFT20 accompanies Golgi-derived vesicles to the point of exocytosis near the basal bodies where the other IFT polypeptides are present, and where the intact IFT particle is assembled in association with the inner surface of the cell membrane. Passage of the IFT complex then follows, through the flagellar pore recognition site at the transition region, into the ciliary compartment. There also appears to be a role of intraflagellar transport (IFT) polypeptides in the formation of the immune synapse in non ciliated cells. The flagellum, in addition to being a sensory and motile organelle, is also a secretory organelle. A number of IFT components are expressed in haematopoietic cells, which have no cilia, indicating an unexpected role of IFT proteins in immune synapse-assembly and intracellular membrane trafficking in T lymphocytes; this suggests that the immune synapse could represent the functional homologue of the primary cilium in these cells.
Statistics
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PSSM-Id: 521545
Aligned: 35 rows
Threshold Bit Score: 98.425
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8BD7_W         8 VYFDEDFHVRILDVDKYNASKSLQDNTNVFINNIQNMQGLVDKYVSAIDQQVERLEAEKLKAIGLRNRVAALSEERKRKQ 87  Chlamydomonas r...
Q584X2         7 VMFDANGAIRMYDPEKFDQLVKTIEVEKRFTTRMDEFKNIVNQTMSIVEQLGKAIEEEKLKAIGSRNIVESEAEERFRTV 86  Trypanosoma brucei
XP_002681631   6 LTFDEEYNLRVFDPAKFSTSEMMKTKSEEFASKIKDFQKLVAEVMQILNNQGKTIEDEKLKAIGMRNLVKGEEDRRKNLL 85 
A0BL10         7 ITFDEQNKIRVLDAEKYRETEQLKIESMDFIKKVLALDEVVQNLNETLEEYSKKIEIEKLRAIGERNKVETEQENRKKKL 86  Paramecium tetr...
XP_001017518   7 ITFDEENKIRVLEQDKYKETDQLKNESMEFIKKVLNLDEVIAQIIETLENYAKKIEQQKLRAIGERNKVESEAENRKKKM 86 
EFJ17666       4 VSIDEESCVRLLPTDTYARCHSVENSCAAFRSKVSSFNKLVKELLGQVGERASKIENAKLCAIGTRNLVRDEMEKRPQEL 83 
XP_002502960   6 VTFDENYRVRVLAQDKYDKTLALADSATEFCEKVAQLNGIVKEVVESVDRQAARTEREKLRAVGKRNQVAADAEQRRRKK 85 
Q8LLV9         8 VYFDEDFHVRILDVDKYNASKSLQDNTNVFINNIQNMQGLVDKYVSAIDQQVERLEAEKLKAIGLRNRVAALSEERKRKQ 87  Chlamydomonas r...
CBJ30699       9 ISFDEECRIRVLDPEQFKHSEMLEEECRGFVDKIREFNASVHTIVEVLHENAARIDKEKLRAIGQRNKVEGELEYRLRQK 88 
XP_004993227  13 MQFDELSKIRVLDPEKHEQTEELGEECRTFLEKINSFHTVMGGFVELVDRLAKAVDDEKMKAIGARAAVDSLSKKRQSEE 92 
8BD7_W        88 KEQERMLAEKQEELERLQMEEQSLIKVK 115 Chlamydomonas reinhardtii
Q584X2        87 QEAQVRLREKQAELDRYIAEYDSLKKVE 114 Trypanosoma brucei
XP_002681631  86 REYNQLITDKHTELERYIDELESLKKVD 113
A0BL10        87 MELSNILNERKAELDRYQIELDSLQKVE 114 Paramecium tetraurelia
XP_001017518  87 MDLNNLLNEKKAELERYSTELESIQKVE 114
EFJ17666      84 QVVKEGIDRRKEELERLRVEHLSLMAVK 111
XP_002502960  86 AELASLRLEKQAELDRLQAEYDSLLRVR 113
Q8LLV9        88 KEQERMLAEKQEELERLQMEEQSLIKVK 115 Chlamydomonas reinhardtii
CBJ30699      89 ASLQTMLKEKMLELDRQNLQYQSLLRIE 116
XP_004993227  93 QLLQAMIAEKRAELERLQVEQDSLERVI 120
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