Conserved Protein Domain Family
CFAP54_N

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pfam14858: CFAP54_N 
Cilia- and flagella-associated protein 54
This domain family is found in eukaryotes, and is typically between 542 and 565 amino acids in length. This entry represents the N-terminal region of the cilia- and flagella-associated protein 54 which is required for assembly and function of cilia and flagella.
Statistics
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PSSM-Id: 494622
Aligned: 6 rows
Threshold Bit Score: 856.789
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q96N23         99 KHEFRRRCATSLFNIWTKYAPRLPADYYNEKLLKVGDSLCQMK-----------------EYKLALLQCYGRYLQQFN-T 160  human
Q8C6S9        104 KYEFHRRCATTLFNIWTKYAPRLPSNYYNEKLLKVGDSLCQIK-----------------EYKLALLQCYGRYLQEFI-A 165  house mouse
3_pfamImport    1 KHEFNRRGAMSLFNIWTKYAPRLPTAYYNEKLLKVGDSLCEMK-----------------EYKLALLQCYGRYLQQFS-I 62  
EDO48350       64 DEEAYARGSNTLFNLWNNFEQRLPHDFFVQQMIATGDYLVSIRrmgithtllsmhtciltEYKIAQCQCYGRYLSSIRgL 143 
1_pfamImport    1 DNGSHAKGIQILVEIWKKYKQRLPSKFYLERMLQIADFLFEIK-----------------LYQTAFWQGYSLHLQQFNsV 63  
2_pfamImport    1 DYESYARGSKNVFEIWNKYKPRLPACYFEENLLLVADFLYRIK-----------------LYKMALWQGYGRYLQQFSsV 63  
Q96N23        161 NFDENKVD--VTQFKATFFPKGFKDKTAGLTFHALSGKNMCNYQLVCDSDENLKNKESVVQCLHILSSLRLIMQVALPQE 238  human
Q8C6S9        166 DFDEHKED--VNHFKTVFFPKGFGDETARLTFHALSGKNICNYQLVCESDANLQNEESVRQCLHILSSFRLIMQVALPQE 243  house mouse
3_pfamImport   63 SFDENIAD--IQQFKTVFFPNGIGDQTAANTFHALNGRNICSYQLVCNNDLNMQNKESVIQCLNILSSLRLTMQVALPQE 140 
EDO48350      144 NTLESCSDytLESFNNVYLPSGIEAATAEIALRALLGESISSYHVVIAEDPKLQNPETVSLSVDILKILRLITQAALHKE 223 
1_pfamImport   64 KITDIT-D--VDHFMSSFFPEGFDTDAFALKIRAMHGCALCMFE--REKRHTALSQKGLCELLRVLNFIRIMMQSLQPHE 138 
2_pfamImport   64 IDNDIT-D--INQFKNIFFPRGFEADNAKLTFRALQGHCLCSFQLESENEGRLQSQASVQKLLDILAFLRLMMQAVLSHE 140 
Q96N23        239 HLCWIIFNGTIYIYTICRKLMVIGQSSKALEYLLWASMCMESLVPLLSLRYLTWRATLYTAVCQCCYDCHAGIHGEAFAR 318  human
Q8C6S9        244 HLCWIIFNGTLYIYTICRKLMVIGQSSKALEFLLWASMCMESSVPLLSIRYLTWRATLYTAVCQCHYDCQDGIHGEAFAR 323  house mouse
3_pfamImport  141 HLCWIIFNGTVYIYTICRKLMVIGQSSKALEYLLWASVCMESSVPLLSIRYLTWRVTLYTAVCQCYYDCQAAIHGETFAR 220 
EDO48350      224 SFCWLVFNGTVHIYSISRHLMALGYSNKVLEFLQWACMCMESSVPLMTVRYLIWRSTLYAATCQCYYDMKAANHAESFAR 303 
1_pfamImport  139 HLCQQIYNGSLLIYNICRYLMTMNCSAQALEYLLWASISLELSITLMSAKYLPLIVTLYCAVCHCYYDNQAGSQAEKFAR 218 
2_pfamImport  141 RLCWILYNGSLHIYTISRHLMAMGHSAQALEYLLWASVCMEMTVPLLTVKYLPWRATLYAAVCQCYYDCQAGLQAEVFAR 220 
Q96N23        319 RALAKIDELRQLELMSSSKSQEESRRYFREATMKMAVMIFKRGVFESRRKNKAVFRPKIRINLREVQT-LSWPRTVTERL 397  human
Q8C6S9        324 RALAKIDELRQLELMSSSSSLETSRKYYREATIKMAVMIFKRGVFESRRKNKNVLRPKLRLNLKEAQS-LPWPRTVTERL 402  house mouse
3_pfamImport  221 RGLAKIDELRQLELMGSSQPPEASRRYYREATIKMAVMIFKRAVFESRRKNRSFFRPKVRVNLKEVQA-LPWPRTITERL 299 
EDO48350      304 RGLTKVNELEDIERMSTSDATPMVARAFRQAKTRMQVMVFKRVVFETRKRPKGLLRPKTKPNLKDTVN-QPWPRTPTERL 382 
1_pfamImport  219 RALGKINELAKLEEQNKLPASRETHRAYKEASIKLASMMFKHAVFEARRRPKHIRRIKSKNTLKDIPN-GPWPCNTTERI 297 
2_pfamImport  221 RALGKVSELSQLQEMSVSPQSPETQRSFREATVKVAVMLFKRAVYEPRRKPKGLFRPKLKSNLKEIQNkLPWPRTPSERL 300 
Q96N23        398 LDEMFDSTASQFLAVLEALSDSNRRILQTGPIVTD-EVEIHDVVSELFMAGKELLI------MSNIGADGMLDFPKT--- 467  human
Q8C6S9        403 LDELLDSTSSRFLAVLEALSDSNRRILQTGPLVTD-EMELRDVVSELFMAGKELLI------LSNVRSNGKLDFPQT--- 472  house mouse
3_pfamImport  300 LDEMFDSTASRFLAVLEALSDSNRRTLQTGPIATD-EVEIRDVVSELFLAGRELLI------MSNTAVDGMLSFPKT--- 369 
EDO48350      383 LADQFTGTAAQFLAILEALSESNRRTLHCEAPASDaEDTITDVCAELFFAGMELIAggggprQTHAAKHQQEIHPSVvdf 462 
1_pfamImport  298 LMALFDSSPAQLLGILETLWDSTRRPLQSR--MPD-EPERQEVTLELLSAGMSILSg--------tSTTGESLVSLSalt 366 
2_pfamImport  301 LVELFEGSAAQFLALLEALGDSTRRPLQTG--LPE-EPELQEVALELLFAGISILAg----tVHHTHTVQHASYTSV--- 370 
Q96N23        468 ---SLLELMIGRKDVISVDAAVKFIKLAFTYEEWSLFESSAVHLIYFLQRQDDPESKKAEKDLTLLIAMEPLINVKRNKg 544  human
Q8C6S9        473 ---SLLEHVVEKRNALSVGASVRFAKLAFTYEEWGLFESLAGQLIHFLQKQDNPQSKKAEKDLILLLAVEPLINVKRNRg 549  house mouse
3_pfamImport  370 ---SLLQFIIERKNIISIDTAVKFTKLAFNYEEWSLFESAAGQLIDFLQTQDDPESKKAEKDLTLLFAMEPLVNIKRNKg 446 
EDO48350      463 gaqGLMALVQEGSNGIPLQAVVKFVKQAFSYEQWETFNTLISPTLELLKQMTDSTGLMDTKTLELMAALEPFFSS----- 537 
1_pfamImport  367 ptsTLMDLAIAGENKVPIRSAMRFIKILFRYKQTDAFTDLAREMQQVLSCVEGHSFEKEKLELALLVSFNRLLSSQRSH- 445 
2_pfamImport  371 -------LLGAGENGVSVEGAVKFVKLLFRYEQWEMFISLASLMIPLLQSLDAPMWFKEELDLKLLVAMEPLITGQKYK- 442 
Q96N23        545 liFPLE-NYKEGQSTQIYLKKIAVHD-----TCLKTCgYSEDIFHLAATLYVCVCTAPQDV--QPDKEIVVDTIMFLWQK 616  human
Q8C6S9        550 liFPLE-TDKETQSIENYLKHIACHE-----SCMRTT-FTEDTFSLAAILHFCVCVPTQGV--LPDKDIVVDIIGLLWQR 620  house mouse
3_pfamImport  447 lvFPLE-NYKEGQAAY-YVKKNAFPD-----TYMKNSgFSDDVFHLGAALYSCVCNSSQNV--QPDKEIVVDMIMFLWQK 517 
EDO48350      538 -------------TPKPKKAAVTTQDesdshTQGKGGsHVDDLMKLADTLHSCSVEPYKSIvgHMDPDMVIDAALFLWSK 604 
1_pfamImport  446 --------PRQDNTIDGSYDEIVLYFmyppdTQKSSFsMGDEFIDLVDNLHKSVCVSALEV--QSDEDLVLDVVLFLWGE 515 
2_pfamImport  443 --YTTKeSNVVGEGGQGAERD----------KSSGPVvMSDDLLALAETLYTCVCVQAKGM--APDLDLTLDIVLFLWMK 508 
Q96N23        617 CKLGIQRLNISRNDYAKFTQKI 638  human
Q8C6S9        621 CKLGIQRLNIPKNDFAKYSHKI 642  house mouse
3_pfamImport  518 CKLGIQRLNISRLDYSKFTQKI 539 
EDO48350      605 CKIHFQRVVSSSMEGCKFVLND 626 
1_pfamImport  516 VKLVIPRDQLQNLQFTHYHEKV 537 
2_pfamImport  509 CKTVFQRVQTGHSDPIRSLYKL 530 
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