Conserved Protein Domain Family
SEEEED

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pfam14797: SEEEED (This model is not part of the current CDD release)
Serine-rich region of AP3B1, clathrin-adaptor complex
This short low-complexity, highly serine-rich region lies on clathrin-adaptor complex 3 beta-1 subunit proteins, between family Adaptin_N, pfam01602 and a C-terminal domain, AP3B1_C,pfam14796.
Statistics
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PSSM-Id: 521453
Aligned: 15 rows
Threshold Bit Score: 29.556
Created: 16-Feb-2025
Updated: 25-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_051693537  623 PAKKFYSEseEEEDS-------SDSSSESESESGSGSEEE----ADSSEDSSASSPSEQEGESASESEgrSKRTAKKSWK 691 
5_pfamImport    1 REEQFYSE--EEVSGsggsnnsSSSSSGSESSSESEEESEgk-kASSSEDSHNSSSDGEKSESESELE--KKGTRKRNHL 75  
XP_028935650  672 LDEKFYSEseEEEES-------SSSNSGSESESSSESEVSgk-kDSSSEDSSEDSSSESESESESENQ---KGTAKLKSK 740 
7_pfamImport    1 PTEKFYSEseEEEDE-------SASTSSSGSGSDSESEKEdkeeGSTDESSGSSSPSEESTDSESDSR---ESAAKKTCR 70  
6_pfamImport    1 PTEKFYSEseEEEDE-------SASTSATESESGSESEKEdkeeGSSDESSESSSSSEESSDSESDSK---ESIAKKASG 70  
4_pfamImport    1 PAKKFYSEseEEEDS-------SDSSSDSESESESESGEDs---MDSSEDSSEESSSEQNSESGSATEaeDKAPTKRSSE 70  
EHB00108      686 PSKKFYSEseEEEDS-------SDSGSDSESESGSESGDDgassEDTSEDS-EDSSNEQESENGSVAE--DKAATKRNPE 755 
XP_003498747  670 PAKKFYSEseEEEAEee---esSDSSSDSEGESGSESGDT----GSSSEDSSEDSSSGQESETGSEAEaeGKRAGKRNSR 742 
Q9Z1T1        683 EEDEDEDEdeEEEEKededenpSDSSSDSESGSGSESGDT------GTEDSSEDSSSGQDSETGSQAEaeRQKVAKRNSK 756  house mouse
Q32PG1        671 PDKKFYSEseEEEDS-------SESSSDSESESGSESGEDe--eDDRSGDSAEDS-----GESGSEPEagKGRAATR-SR 735  domestic cattle
XP_051693537  692 TRAKSDSEDEEKE----NEKSKSSDSSSAESSSAEESSSDAESES 732 
5_pfamImport   76 DKSRSEGEKRGKK----SSKKKDYSSSDSESSSSEDSLSETESES 116 
XP_028935650  741 SVQESASDPDKMK----TRKLEDSGSSNSDSSSGEESS--SESES 779 
7_pfamImport   71 AVNESDSEDIKKKaegvSKKRSTSSSSDTEYTSSDESSTGSKSES 115 
6_pfamImport   71 AVKESNAEEIKRKakgiSKNRNTSSSSDTVSSSSEESSSDSKSVS 115 
4_pfamImport   71 TRGKSDSEDGKKK----NKKSKTSDSSNAESSSVEESS--SESES 109 
EHB00108      756 TKGESDSEDGEKK----NKKSQTSDSSNVESSSIEESS--SESES 794 
XP_003498747  743 LKRKSDSEDGEKK----NEKSKTSESSSAESSSMEESSSGSESAS 783 
Q9Z1T1        757 TKRKSDSENREKK----NENSKASESSSEESSSMEDSSSESESES 797  house mouse
Q32PG1        736 ARGRGDSKDVDKE----KENSKTSESSSGESSSIEESSSDSESES 776  domestic cattle
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