8U6X,1FVI


Conserved Protein Domain Family
DNA_ligase_OB_2

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pfam14743: DNA_ligase_OB_2 (This model is not part of the current CDD release)
DNA ligase OB-like domain
This domain has an OB-like fold, but does not appear to be related to pfam03120. It is found at the C-terminus of the ATP dependent DNA ligase domain pfam01068.
Statistics
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PSSM-Id: 521410
Aligned: 79 rows
Threshold Bit Score: 51.3523
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8U6X_A               211 NAGRLGAVGCKNr-H----G-E--FRI-GSGFKDKDRDN------P----PKIGTLI--TYRYRGFTRKGT----PKFAT 265 Neisser...
XP_001470475         359 FKSALGAFVCTTk-D----GkH--FNT-PPKVSCKHRIElwe-hrR----EYLGKYL--TVQYQELSSQNV----PRFPI 419
Q4DIW5               151 WKGCLGAFVCRTk-R----GhQ--FTV-APATTEQRKKDmwq-rlA----QYKGKML--TVQYQELSANGV----PRFPI 211 Trypano...
XP_001562367         557 WKGFLGSFICVTpdK----KhR--FTV-TPASTDAEKRRmwqswkT----AYKGKVL--TVQYQEITPDGV----PRFPV 619
O41026               229 EEDVMGSIEVDY--D----GvV--FSI-GTGFDADQRRDfwq-nkE----SYIGKMV--KFKYFEMGSKDC----PRFPV 288 Paramec...
REF_PBI:SPO1_157     352 HEGSLGALIVEY--K----GnT--VNV-GSGFSHQLRAElwa-nkE----AQTDRII--EIEYKEETTDKNgkhsLREPR 415
Q7Y5P5               234 YKGKVANLIFKW--K----GgKtiKAMlGRGWTHEDATRmyhdikHggelNVIGKIF--AIKALQESSKGV----LRLPK 301 Salmone...
CGS-ASRI:BpOF4_20089 158 YAGMMELGIPSE-------AkNvfYSI-ASQLITREKENv----------VYIEPIIqcKVKYRNMTSKGL----LRLPS 215
YP_002455980         227 PSGMVGAFVCRN--EvlwpGvT--FNVsASSLTHDEKKRlwn-drE----HLKRQVI--RFKHFSHGAKDK----PRHAV 291
1FVI_A               228 eEDVMGSIEVDY--D----GvV--FSI-GTGFDADQRRDfwq-nkE----SYIGKMV--KFKYFEMGSKDC----PRFPV 287 Chlorel...
8U6X_A               266 FVRV 269 Neisseria gonorrhoeae MS11
XP_001470475         420 AKAI 423
Q4DIW5               212 GKCV 215 Trypanosoma cruzi
XP_001562367         620 GKCV 623
O41026               289 FIGI 292 Paramecium bursaria Chlorella virus 1
REF_PBI:SPO1_157     416 FKRF 419
Q7Y5P5               302 VGEL 305 Salmonella virus SP6
CGS-ASRI:BpOF4_20089 216 FVEF 219
YP_002455980         292 FDCW 295
1FVI_A               288 FIGI 291 Chlorella virus
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