Conserved Protein Domain Family
GDE_N_bis

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pfam14742: GDE_N_bis (This model is not part of the current CDD release)
N-terminal domain of (some) glycogen debranching enzymes
This domain is found on the N-terminal of some glycogen debranching enzymes and is usually followed by the GDE_C (PF06202) and in this sense it is analogous (but probably not homologous) to the GDE_N (PF12439). Its exact function is unknown
Statistics
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PSSM-Id: 521409
Aligned: 127 rows
Threshold Bit Score: 103.836
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015192596  38 KDEDIFLVTDTLGNIPgclagetKTTSLGLFCRDTRFLSRLELQIEGKLPILLSSNARRGF-TLSALCANPYLEDqqIGA 116 Stanieria cyano...
WP_011874391  16 lcAPSVAISAPDGQIR-------AGGASGFYRHDRRGLALLEIGVEGAELVPTGANAPEAGrACFHGVLRGQGEA--NPD 86  Saccharopolyspora
WP_015657320  35 lcaPSLVISQESGQLS--------GGADGFYHGDRRALSRLTVAAEGIALAPVHGGLRGADrADFRAILRGLGEV--TAD 104 Streptomyces da...
WP_014177015  35 lYAPSFVISRADGQLG--------GGADGFYHGDRRALSQLAVTAGPIALAPVGGGLRGADrADFRSILRGLGEV--TPD 104 Streptomyces
WP_015795309  22 VKAPVFGLSGTGGALS-------GQGVAGVFADDRRVLSVSEIALSGARLVPIASELVGADaTRSVLVARGLGED--GAD 92  Catenulispora a...
WP_023561770  15 vaAPTSALAGPDGQVR-------TAGVQGVFHADARVLSEAVLRLDDRETEPIGHADAGAGtTHFVSLARWLGDP--GPD 85  Actinoplanes fr...
WP_012890607  37 vmaPTTALSGGDGQIR-------PAGVQGLFHADSRALSQVRLEIDGREPEAVGYAPHGAGgARFVALARWLGDP--SPD 107 Streptosporangi...
WP_015882452  20 laAPTQAWSGADGQIR-------HGGAHGVFHGDVRALARAELLVAGEEPEVIAAGPQGRGrVHVVALARGIDAA--GAD 90  Beutenbergia ca...
WP_013838310  15 lQAPSQVWCARDGQVH-------PHGAQGVYHADVRVLSTAVVRVNDLLPEEISAGRSGPAeLEAVGVLRMIDGP--GAD 85  Isoptericola va...
WP_012877910  19 lRAPSQVWCSPDGQVH-------AHGLHGVYHADVRVLSQAEVRVDGELPEAIAAGGTGPGtFEASVVLRGIDGP--GAD 89  Xylanimonas cel...
WP_015192596 117 ETIGIQREIVING-G-------------LFEELAITNYRTTPVSFELSLSFDADFVDLFEVR-GWE-R-QERGK-Llrlm 178 Stanieria cyano...
WP_011874391  87 PVLHYRRERRAGGeS-------------FAETWTLCNHSSRDADLVVTARVATDLARMDLVKaGAPgAlAEPE------- 146 Saccharopolyspora
WP_015657320 105 PAVALRRLRRTVAgR-------------LEEIFEVTNAGTEHVHLRLTVTAATDLATMEQVKsGQVlEtVAPQVaD---- 167 Streptomyces da...
WP_014177015 105 PAVTLLRRRTVASgR-------------LEESFEVTNAGTQRVRFRLTVTAATDLALMERVKsGHVlEpVRAE------- 164 Streptomyces
WP_015795309  93 PAVWVERSRVLVDgSdsdsdsdsgsravVREIVEIRSASRRRVQTTLSMTLGCDLAEISAVKsGYSpGaLP--------- 163 Catenulispora a...
WP_023561770  86 PTVRVQRTRIITPgL-------------LEERITIASGAAGQVSTTVTVDLAVDLAPIEVVKsGSRgTpIAAHR------ 146 Actinoplanes fr...
WP_012890607 108 PTVRIHRVRQVVPgG-------------MSERIEIVSTASRPVTATITLALSCDFAPIEVVKsGGEtTpAAVAG------ 168 Streptosporangi...
WP_015882452  91 PTVRLDRVRRVEPgA-------------VREDITVTCAVPGTARGRLEIVLGSDLADMDAVKaGRTpAlLPVH------- 150 Beutenbergia ca...
WP_013838310  86 PTAMLRRRRVLRPgE-------------VSEELELSCGTDDPVSGRVTLRLASDLARMDDVKqGAAtSpLPPQ------- 145 Isoptericola va...
WP_012877910  90 PTTLLRRRRTVTPgE-------------VTEELEVSSGTDVPVSGRVSVHLASDLARTETVKqGLPtApVAPE------- 149 Xylanimonas cel...
WP_015192596 179 dlasdedntslsaedaastselgqarnpsiyeshpdffgrnlsdslksNHSEELTLAYQGLDGAVMETRIQFSSrQPDY- 257 Stanieria cyano...
WP_011874391 147 ------------------------------------------------ATGDGVRWQGDGCAVDLAASRTADDVsIEDNq 178 Saccharopolyspora
WP_015657320 168 ------------------------------------------------ADGVGLSWSSGDFSVQLASEPAPDALqVPag- 198 Streptomyces da...
WP_014177015 165 ------------------------------------------------SDSHGLAWSRDGFSVRLVSEPAPDALeAAEAa 196 Streptomyces
WP_015795309 164 ------------------------------------------------AEAVHSGLQWVGLGAENRDIVQAIAQhAPAVv 195 Catenulispora a...
WP_023561770 147 ------------------------------------------------SADGTLTWERDGITVTVTAPEAETDNhg---- 174 Actinoplanes fr...
WP_012890607 169 ------------------------------------------------GGPGELTWGSGGIRVTVAGVDAHAEPaEAGRa 200 Streptosporangi...
WP_015882452 151 ------------------------------------------------ADGDRLTWAAAGVSVAVEAPGAVVDArDLAap 182 Beutenbergia ca...
WP_013838310 146 ------------------------------------------------AVPEGVRWTDGTAVVDVSAPGASVEVdDDga- 176 Isoptericola va...
WP_012877910 150 ------------------------------------------------VTSDGVRWSDDGTVVDVTAPGAEIHAdHAga- 180 Xylanimonas cel...
WP_015192596 258 --FkghtaVWQLTLDPHQTILLSYR 280 Stanieria cyanosphaera
WP_011874391 179 v-----rlSWRVEFPAGAQWSLSFa 198 Saccharopolyspora
WP_015657320 199 ------qlSYDIDLQPGASWSVTLH 217 Streptomyces davaonensis
WP_014177015 197 eg----rlSYDIELAPGTSWTATLR 217 Streptomyces
WP_015795309 196 daKqg-rlSWPVKLEPGESARFSIE 219 Catenulispora acidiphila
WP_023561770 175 ------rlTWAVTLGPGADQTLTFS 193 Actinoplanes friuliensis
WP_012890607 201 g-----rlCWPVTLAPRGRTTLRWD 220 Streptosporangium roseum
WP_015882452 183 ------riAWDVEVTQRAPVTLSWT 201 Beutenbergia cavernae
WP_013838310 177 ------tlTWDVTVTPGEVVTLRWg 195 Isoptericola variabilis
WP_012877910 181 ------tlMWDVRVTPGQPVTVGWS 199 Xylanimonas cellulosilytica
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