Conserved Protein Domain Family
RTTN_N

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pfam14726: RTTN_N (This model is not part of the current CDD release)
Rotatin, an armadillo repeat protein, centriole functioning
Rotatin and its homologues such as Ana3 in Drosophila are found to be essential for centriole function. A deficiency of rotatin in mice leads to randomised heart tube looping, defects in embryonic turning, and abnormal expression of HNF3beta, lefty, and nodal. Thus it is required for left-right and axial patterning. Ana3 - the Drosophila homologue - is present in centrioles and basal bodies, is required for the structural integrity of both centrioles and basal bodies and for centriole cohesion. Rotatin also localises to centrioles and basal bodies and appears to be essential for cilia function. This family represents the N-terminal domain.
Statistics
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PSSM-Id: 521394
Aligned: 25 rows
Threshold Bit Score: 82.6378
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001986548   25 EIRMLAFEQIETSFIHCLIYEDAItIKPMLLLRQLIRWFGFTPLA-DPDRILALMLE-LMRSRYGKVIPEKMSlQRLeke 102 
XP_004989644   64 QTRLHAVEQLLLYFQHTDISLPTL-LETEDFLRELLQWFNYEHVS-HYSQALEILQY-VIALPEGARQVGEIG-LQF--- 136 
XP_003058603   27 DVRVRALQSLQFKLENELLSFDDV-AVHEPTLRAMLEMFNFADTGmREAETVAMFSRiIAERPIAVKTLRGLGaMRF--- 102 
XP_002507995   27 DIRERAIASLNFKLSNDLLTFKDV-GSHSGVLRALLDWFGHEDSVpGDERALAMLRRiVEEEPTAAARLQNLGaEAA--- 102 
XP_015019454   28 EIRMRALEQIETRFIRCLQHDEAInFKPVLLLKQLIRWFGHTPLA-APDRVLALMLE-LLRSDYCETVVNKIPcQRLeae 105 
XP_001990953   25 EIRMRAFEHVETSLMRCLHHEEAInFKPVVLVKQLIRWFGFTPPT-APDRVLALLLE-LMRSDYGDVIIRKIPcRRFqte 102 
XP_001959389   25 EIRMRALEQVETRFIRCLSLGEPLqFKPVLLLKQLIRWFGYTPLL-AADRVLAMLLE-LLRSKYSDAVIRKIPqSRLete 102 
XP_046865845   25 EIRMRTLEQVERGFIRCIRLKETLnFKPQLLFKQLIRWFGYTPLI-AVDRVLTLLLE-LLRSEYGNVVVKKITyERLcie 102 
EDX06743       25 EIRMRALDQIETRFIRCLQLGEPIqFKPVLLLKQLIRWFGYTPPL-VPDRVLAMIME-LLRSEYAEAVIRKIPyERFkae 102 
XP_001747380   46 EDRVGALHSITFKLACGLLLVSDL-VHKESLLKALLEWFNFEDVA-EHSAVLNLILK-LAEHPASAALLVDLGaVDF--- 119 
XP_001986548  103 LLKIRlqcfAIPANLMATRCMDLLGDL 129 
XP_004989644  137 LTDLR----THCQEHDDEAFHAHVEVL 159 
XP_003058603  103 FAELA----DNSGKHVRPEIDALMKTM 125 
XP_002507995  103 LLEVT----DGASRQLAAQIESLVEKI 125 
XP_015019454  106 LNKIR----KILKNVESKRVMELLDNI 128 
XP_001990953  103 LGKIR----QILRGLSTERCLKLLDKI 125 
XP_001959389  103 LAKVR----RILGSEESKRVMDLMEDL 125 
XP_046865845  103 LEKVM----KILYSIGAKQGIDLMKEL 125 
EDX06743      103 LEKVR----RVLHKQESKRISELLDDI 125 
XP_001747380  120 MRDLH----DYDPNSLDNEVIEQISHA 142 
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