Conserved Protein Domain Family
Snapin_Pallidin

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pfam14712: Snapin_Pallidin (This model is not part of the current CDD release)
Snapin/Pallidin
This family of proteins includes Snapin, this protein is associated with the SNARE complex, which mediates synaptic vesicle docking and fusion. It also includes the yeast snapin-like protein SNN1, which is a part of a complex involved in endosomal cargo sorting. The family also includes pallidin, a component of a complex involved in biogenesis of lysosome-related organelles.
Statistics
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PSSM-Id: 521383
Aligned: 66 rows
Threshold Bit Score: 47.5643
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_025174315  13 LLSEGFLAHFIPTLTQVEEQLRELERRQKLLLEEMKTTNTRMENQDNYEYiaLSFSKIPQYHEKLQYIRNTMISMLSRSK 92 
XP_004998458  14 MLSQGLLGMWQPMVAQLQDTLHEIVESQEELVARVSEESSNVATNKALEEvaLVMSQVPTYTQKLVQIRKDMVSLHEKSN 93 
XP_067746805 127 AMSNAFVDTVQPSLDATIHRIAELKESQQRLLKMLTEQNNGLQANKQLEDaaVVLEKLPFYAKKLQGIKLAMQEISISTE 206
5_pfamImport   2 VMSNAFVDIVQPSLDGTIHRIAELKESQQRLLQMLTSLNASVQTNERFANaaAVLDKLPFYSRKLQGITMAMQEISTSTA 81 
XP_002505096  42 raAEALASSSGADIARVQATLQELRKCQEAVSEQLGETREAVLWLQRLEVveQQMILIPDYQVKARKLAHDMKNVEERLL 121
XP_001638656  42 ILSTEVLAAFLPEMDEAKEKINELTQNQGILIETMQQENAKFAESQEAKAlaEILSQVRAYHIKLNKIKHEMSSINERVA 121
XP_002119717  62 VLSHHFFKEFEPMLKETKAKLTDIEQNQKVLIESLEREGEKLKENGDFVEieSAMSTVHSYRVKLKRIKRNMSYLKEATM 141
3_pfamImport   2 ILSQHFFREFEPMLCETKAKLNDVKQNQTVLIESLEREKDKLKEISMINEieEAMSTVHSYRMKLVKIKRSMGLLKEAST 81 
EFA06046     227 CLSQGLLNVYEPSLTQVEKALKELTDKESVLLDQIHSENLSLAETQHNDHlnEMFTKIELYQTKLTNIKKEMKNLHDKSL 306
EFX74033      16 NLARALLENHEPKFVAAEDSLQDLTAKQDMLMGQVFRQTDCLSEAIKHTQvyEMVTQTKIYQNKLLSLQKEMADLSERSQ 95 
XP_025174315  93 NLNQRVSQLK 102
XP_004998458  94 RMKKRAEKLA 103
XP_067746805 207 KMKRRAEGLr 216
5_pfamImport  82 RMKRRTESL- 90 
XP_002505096 122 KAKKRAEKLi 131
XP_001638656 122 RLKRRAQKLK 131
XP_002119717 142 RLQKEAFHLE 151
3_pfamImport  82 RIRKEACHLE 91 
EFA06046     307 KLKKRALKIQ 316
EFX74033      96 KIKKRALKLQ 105
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