Conserved Protein Domain Family
LINES_N

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pfam14694: LINES_N 
Lines N-terminus
This family represents the N-terminus of protein lines. In Drosophila this protein is involved in embryonic segmentation and may function as a transcriptional regulator.
Statistics
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PSSM-Id: 494473
Aligned: 21 rows
Threshold Bit Score: 305.784
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_016156514 194 TLASIIKETLKDALVPRAGVLKKLLAPLDAVLEGFFNAILLHHFDSHHYTSpy-sE----ATNNLISFVDLLEALLASRV 268
EFN64138     202 NTHIISDTESFDSTAIKEMCVKALESKWTILVSKFKIILRTYTPQHASV---------------VITFLHLWETIISVKA 266
NP_001127865 203 NVITISDPESLDSTPVKAMCVKALESKWTVLVTKFDAILGSYTPQHESA---------------VITFLNLWESIISVKA 267
3_pfamImport   1 HVLSVSDPDSLDSSQIKCLCIKALEAKWPAIVGKFDRILATSPTQHEST---------------VITFLGLWEAIISVKA 65 
XP_002432457 210 NATSLMDTESPDSSEVKCICIKVLEVKWPDLVKKVDDMISTYTSENECA---------------IVTFLGLWESIISVKA 274
XP_002005702 448 HVVALTDSESFDTTHLKCVTIQKLEHKWPTLVKHMSELM-APVHQDSAEHC-------------VLNFLQLWENIISVKA 513
XP_008117548 190 TLTNMIKEILKDEGFCKRGDLKMVLMPLDEILKGFYDSVMFCYSDIPQDYPis-aK----ATNDLSSFLDVLELLVASRI 264
XP_004912720 168 TLICVFKGLLRDENLQQGDILSVLLQPLDPTFERFCSSLLSDVGTTHCQTSaldpE----SSCCLSCLLDLMELLIALRI 243
XP_007237295 164 SLTEVIKGILRGECANKPEILRKLLAGFEEVLTSLFSKMLLHDAFENSQVAenitD----LDVTVSTFMDLLEALCAARL 239
XP_015198441 184 SLTFVIKGLLRGVFQQKMEILGKLLTSLDLVFPALHSMMF-SFADFSQELSts-sKyefgFETSLASFIDLIEVLIAART 261
XP_016156514 269 ELELPL-RCQRILFLKVSYVLNVISSSIPYVIKKKFILLLKKCVLYKSREDAKSGS---LFLETPSLCEDMLALSNAVLQ 344
EFN64138     267 NLSV---IDTKPFYSKLNDLVWLLNSNLPSVVWRHLLSLFNEVLCYGS-----------TLALQDMLPDEPCSLATLIVR 332
NP_001127865 268 NLSV---IDTKLFYSQLDNLVMLLNANVPGIIWRHLIGLFNEVLCYGS-----------TLSLQGILPEEPCLLAHVVVR 333
3_pfamImport  66 NLSI---VDTKPFYAHLANFVALLNSRVSPVVWKHMLDLFNEVLCYGS-----------TLALQDILAEEPCSLAHLIVR 131
XP_002432457 275 NLSV---IDTKPFYSNLYSFIVVLNSSVPSTVWKHLLNLFNEVLCYGS-----------TLALQECLAEEPCALAHHVMR 340
XP_002005702 514 NLSI---DETRPFYAQLDKFELLLNHNLSCTVYKQMLCLFNEALCYGS-----------TLALQDMLPEETCRLAHQIVC 579
XP_008117548 265 QLPLNL-SCQRMLFLNASFILGLATAPVHDFIKKKSIVLLKKCILHKAGEDLIKRKmppSSYQDSYISADTSVLAGAVLQ 343
XP_004912720 244 KYKRSLpLCHTVLSVTIPQAFTLVSSPVAYYVKRQFILVLKRSLLKKAGEDFYPVLhsmSQPGDPVLEQEITMLVLALLN 323
XP_007237295 240 RYGVCS-TVQRLMFLHSSVLLRLMDSCLGYFVKKRVLLLLKRTVVQRPGEDCALGDrhsALQEDEFLAGDMLVLADAVLQ 318
XP_015198441 262 KLKTLA-SSQRLLFIQASLALQLVGSPVHCSVKKKMLLLLKRCLLQKAGEDFSIGQvkgSLLRDDILDSDMLMLATAVLQ 340
XP_016156514 345 VV-NLTWLNQIPVSGKSSSFG---------------------------SSEAAHGHDSRGGSDQTVLRALSLVVLKALEF 396
EFN64138     333 VVkDHRLLDALPYRHGSGRFG-----------------------------------GGTGDGDRPLLQKMVLLVLKSAAV 377
NP_001127865 334 AVkDWRLLDSLPYRHGSGRFG-----------------------------------GGSGDGDHPLLQKVVLLVLKSVAV 378
3_pfamImport 132 SVkDWRLLEAIPFRDGSGRFG-----------------------------------GGSGDGDRPLLQKAVLLVLKAVAV 176
XP_002432457 341 SVkDWRLLDLLPFRNGSGRFG-----------------------------------GGRGDGDRPLLQKMALLVLKSVAV 385
XP_002005702 580 HVrSLRILESLPRRQPQNIVGligyngapvnyvpgtllahnslpahegTEAAAAGSVGLIEMDKTLLQKMVLLVLKSIAV 659
XP_008117548 344 SV-NSGWLNRLIVSEKSSHFG---------------------------GTLVKPEESPCSSADQVTLGALSLVFLKALEI 395
XP_004912720 324 SV-DQGWLLQVPIRDRISSFG---------------------------GSYMASES----SPDLVVLGAVCLSVLKALEI 371
XP_007237295 319 EV-AAGWFRRVWVKPQPSFLG---------------------------GNRQKFPEGE--GKDVVMLRATSLILIKSLQI 368
XP_015198441 341 SP-FSGWLQSVSVSSNPSYFG---------------------------GTSIV-GENVLGSADCVMLRAAILTLIKSLEY 391
XP_016156514 397 KINNSAT-EAE-----------------IKGDFESSMSQLLMFWRSHVKPsp-qSHpvvHHCEWLSLVFMEQDDDMWEAA 457
EFN64138     378 TVRETRS-DSSdssldseaedldedmavIDRSIREVLRQLDQCVKALMP-----FHpemPLSQWVVQMFHDQDDFLIEGM 451
NP_001127865 379 TMRETRSdSSSdsslasdtedldadmviIERSIRGVLRQLDQCVKQLMP-----FHpemPLSQWVVRMFNDQDDFLIEGM 453
3_pfamImport 177 TVKETRCeSSSdssvcsesedadadmavIERSIREVLRQLDNCVKALLP-----FHpetPLAQWVVQLFSDQDDALVESM 251
XP_002432457 386 TVKETRYeSSSdssvgseaddvdadmavIERSIREVLRQLDNCVKQLLP-----FHpetPLAQWVVQLFADQDDSLIEAM 460
XP_002005702 660 TVKEIRS-DSSdssidstdydafqdiqlIERSIRDVLSKLETFIKQTLE-----FHpecHFSKILIHLFDDQDDHLIEAM 733
XP_008117548 396 KILDS---EAE-----------------TQVHLENVMSPLLMFLKRYLRPsa-cVHplgHLCMWLSVLFIEQDDDLFEAS 454
XP_004912720 372 QLLEVTL-SSI-----------------IAEKLQSVMDQLLAFLRHHLG-----WQkpwHPCEWVSLVFIEQDDDMLEVA 428
XP_007237295 369 RTQHAGTeESE-----------------RALHVQEYLLELLAFLQQRVAQ----FKgepHSCSWILMVFAEQDDDMMEAL 427
XP_015198441 392 KVLH--A-GSV-----------------PGFEIQGYLPSLMLFLKKHLNAteqqLC---HPCSWVSVVFLDQDDDMMEAA 448
XP_016156514 458 KALLLIYLKFDRLrCDAADTLSq-KEEESWKFLVHEGGYN---PHCIFLFFLEKIAFDSTVLLDFLISSETCFLEYLVRY 533
EFN64138     452 VCCLDVAVGLFYRgSPNGPVSR--------------SVLSplrPTLTFVQFIHVVAHDPDVLLDLLVSNETCFLLYLLRF 517
NP_001127865 454 VCCLDVANGLFYRgPPQNTDLA--------------NMLS---PTLTFVQFIKAVSNHHEVLLDFLISNETCFLLYLLKF 516
3_pfamImport 252 VCCLDVSVGLFHR-ENASQDLR--------------RALS---PAISLAQFLRTVSHGPDVLLDLLVSNETCFLLYLLRL 313
XP_002432457 461 VCCLDVRVGLYYS-PTMTPNLS----------------LS---PTNTLIAFLHVVSHDPDVLLDLLVSNETCFLLYLLRI 520
XP_002005702 734 VCTLDVTSGISFR-NNAFPELV--------------AMLN---PVYTFLEFLKMASNSSDLLLDLLVSNETCFLLYLLRF 795
XP_008117548 455 KALLTIHVKIERVwHDIGSTASh-LDYETW---THQNGCN---PHCIFLFLLKSIAFDATVLLDFLISSETCFLEYFVRY 527
XP_004912720 429 NILLKMYLRCQNFwSQVPVCVNpgNEMGIWDGISHQFGCD---PNCIFVLLLNSVAFDTSVLLDFLISSETCFLEYFVRY 505
XP_007237295 428 KTLTSLYL-FQRS----TSSSG--CDACSW-------GCN---PHCHFILLLHSLCFDHTVLLDFLISTETCFLEYCVLY 490
XP_015198441 449 KAMLTLYLHFRRV-----SNTEv-CDAELFVQLTHEYGCN---PHCHFLFFLNSVAFDHTVLLDFLISTETCFLEYFVGY 519
XP_016156514 534 LKLLGKEWHQFVDVC 548
EFN64138     518 LKYIRRNWGEFVECC 532
NP_001127865 517 LKYIKRSWPEFVSCC 531
3_pfamImport 314 LKYIRRNWHEFASVC 328
XP_002432457 521 LKFMRRNWSEFVSCC 535
XP_002005702 796 LKYIRMNWTMFVHSC 810
XP_008117548 528 LKLLVENWHQFVQIC 542
XP_004912720 506 LKLLKEDWPRFCLTC 520
XP_007237295 491 LKLLRDNWQDFSDSC 505
XP_015198441 520 LKILRENWQDFCYIC 534
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