6GZQ,6XYW


Conserved Protein Domain Family
Ribosomal_TL5_C

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pfam14693: Ribosomal_TL5_C (This model is not part of the current CDD release)
Ribosomal protein TL5, C-terminal domain
This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, pfam01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family pfam01386). The function of the C-terminal domain of TLC is at present unknown.
Statistics
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PSSM-Id: 521371
Aligned: 548 rows
Threshold Bit Score: 53.5702
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6GZQ_U1        95 PVEMYVPLRFVG--TPAGvragGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEIGDSLHASDLKLPPG--VELAVSPEET 170 Thermus thermo...
WP_006426084   97 KVHSVAEIVLVGheKDAG----GVLEQLLEEVQFKAYPSALVDKVEVDVSNMKVGDSIKVKDLTLSSDkdVDVMTDPETT 172 Dorea
64_pfamImport   1 KVHSTAEVHLINleKLAA----GVPQQMLHEISFKALPAALVEKVEVDVGDLKVGDTIRVCDLPIAQDkdVDLMTDAEAT 76 
68_pfamImport   1 VVHSVAEIVLVNhdKLES----GVLQQQLEEVSYKALPSALVDKVEIDVAELRVGDTIKVKDLSLAQDkdVHLVTDPETT 76 
3_pfamImport    1 -VHSVAEIILENeeMVVS----GVLQDELKEVAYKALPADLVDKIKVDVAGMKIGDTLRVKDLEIAKNknIHITTDLESV 75 
WP_022203335   97 KVHSVAEIILLNhdKVIS----GVLQQRIQEISYKALPDAIIDNVKVDVGDMRVGDIIRVGDLDIAKNknIELVTDLDTA 172 Enterocloster ...
CDD46924       97 KVHSVAEIVLINhdKLAA----GVAQEMLHEVSYKALPAALVDKIKIDISSMEVGDTIRVKDLEIAGNkdIDILTDLDTP 172
72_pfamImport   1 -VHSVAEVILVNhdKVAE----GVVQQLLNEVSYKAYPSAIVDSVKVDVSQMKIGDTIRVKDLDIAADkdVEIHTDLEAP 75 
65_pfamImport   1 KVHSVAEVILVNaeKVAS----GVVQEGLSEIAYKALPAALVDKVKVDVGNMKVGDTIRVKDLEIAKDkeIDLSTDPEAV 76 
66_pfamImport   1 KISAKAQIVLLHedLA-D----GCVDEELSEIDYKAEPENLIEKVELDFEKLGKVKCVHVKDIPEFCSdkIDLITSPDAI 75 
6GZQ_U1       171 IAAVVPPE 178 Thermus thermophilus HB8
WP_006426084  173 VVTLQYVH 180 Dorea
64_pfamImport  77 VVTITEVH 84 
68_pfamImport  77 VVTVTES- 83 
3_pfamImport   76 IATVTPV- 82 
WP_022203335  173 VATVIAVH 180 Enterocloster clostridioformis
CDD46924      173 VVTVTAVH 180
72_pfamImport  76 VVTVTAVH 83 
65_pfamImport  77 VATVTAVH 84 
66_pfamImport  76 VFTVEEA- 82 
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