3PSF,7XN7


Conserved Protein Domain Family
HTH_44

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pfam14641: HTH_44 
Helix-turn-helix DNA-binding domain of SPT6
This helix-turn-helix represents the first of two DNA-binding domains on the SPT6 proteins.
Statistics
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PSSM-Id: 494422
Aligned: 48 rows
Threshold Bit Score: 90.3199
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3PSF_A         107 YGNMSSEDQELERNWIAEK----ISVDKNFDAN---------------YDLTEFKEAIGNAIKFITKENLEVPFIYAYRR 167  brewer's yeast
XP_014329600   294 VKPAEDEELEEEAEWIFRHgfstLTISMQESTDyldrgt----ttnfsRKGPSTIAKIKEALNFMRNQQFEVPFIAFYRK 369 
ELK01842       305 VKGAEDDELEEEADWIYRNafatPTISLQESCDyldrgq---ptssfsRKGPSTIQKIKEALGFMRNQHFEVPFIAFYRK 381 
6_pfamImport     1 -EPATNDEVQEEAIWVARS----IARARGq-----------------eEPDEQFTTAVAYVVGFFTREFLEVPHIKDHRR 58  
11_pfamImport    1 ----QEEDLELAAEWMSTR----ISLRAHehfimrd------ssgdrpPHHDAFITAIKNVVRFMNIELLEPPFIWAHRA 66  
XP_012190333   336 erklTDAELFEAAKWASTR----ISTRTAaeflde--------aglfhRQRSEFINAVQLMLSYMLNDLLEVPFLFQHRF 403 
8_pfamImport     1 -KSLTENDLDDAASWVITR----ISTRKErdffrp--------dgqyhRYLPDLVQAISYALRFLFILEFEVPYIWNHKR 67  
XP_013023967   286 NSDCTDQELLDESHWITNQ----LLEKRLDINS---------------ELLEPFRFAVRHAVHFFVRESLEVPFIWQHRR 346 
Q09915         281 NIDCSEDEFREQVAWIIDY----LLKNRRDIDA---------------ELYEPFQTAVRYVVHFFIRDSLEVPFIWQHRR 341  Schizosaccha...
XP_018669985   313 VKPAEESELELESEWIYKYcfvePSISKQDAIEdlgstfssstlstlnRKPPSCVGKIQDTLNFMRNQQYEAPFISFYRK 392  vase tunicate
3PSF_A         168 NYISSREKDGF--------LLTEDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHI---------DD 216  brewer's yeast
XP_014329600   370 EYVe--------------pELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSfqfeqisadPD 421 
ELK01842       382 EYVe--------------pELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKMQAyqyeqisadPD 433 
6_pfamImport    59 DFFIEVDKLTGas----raLLTEKDLWEIYDWDFKYHGFLERRQALKDFLQKTQI---------FD 111 
11_pfamImport   67 DYLVVRDGrd-------iaLLDHDDLWRISALSIKYRALLHRKRELKAHFNQLEV---------ED 116 
XP_012190333   404 DELEHHYYDEVeqqsrtidLLTRRELYTLSGLGLKFKTLLVRKDQLRATFNKIHV---------DV 460 
8_pfamImport    68 DYISYFNPQDMrtr---ieLLSLDELWRVYSVGQKFRSLMERRQALDALYSRFGV---------QD 121 
XP_013023967   347 DYIVHYDRQRDsi----tpLLNQDDLWRIFNLCTRYWSLHSKKNDLMKLYTDLGI---------SD 399 
Q09915         342 DYIVHNNRERNti----tpLLSQNDLWNIFFLCTKFWSLHSKKQDILKLYSDLGI---------ND 394  Schizosaccharomyces pombe ...
XP_018669985   393 EYVe--------------pELNIHDLFKIYHWDEKWTQMNVRKASVTRLMQKMQTfqyeqisadPD 444  vase tunicate
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