7O78,1DBG


Conserved Protein Domain Family
Chondroitinas_B

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pfam14592: Chondroitinas_B (494386 is an unknown moldel)
Chondroitinase B
This family includes chondroitinases. These enzymes cleave the glycosaminoglycan dermatan sulfate.
Statistics
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PSSM-Id: 494386
Aligned: 6 rows
Threshold Bit Score: 547.493
Created: 22-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7O78_A         6 VASVKEVYSKVDQLKAGDTLLLKDGIYKDIQLVVKRSGSKEKPIVIAAQNGGKVFFTGDAKVELRGEYLVLKDIYFKDG- 84  Pseudopedobacte...
WP_013188043  32 VTNTKELTQAIKDCVAGDEIVLKNGVWNNVQIDFYGEGTEQKPIILRAETAGKVSIEGESFINLGGSYLEVRDLYFKNGh 111 Croceibacter at...
WP_038528726  30 VNNAKELDQAIKAAKPGDHLVMANGVWTDIIIKFKGVGTEAQPIVLEAETPGKVFIEGQSRLRLSGEYLEVSGLYFRNGf 109 Formosa agariphila
WP_015481700  26 VSSNSELEEALSNAKKGDNIVLKNGTYKDVNIKFIGEGTENEPITLSAETAGEVFIEGESSLELSGNYLQVSGLFFRNGh 105 Polaribacter sp...
CAZ98265      39 VKNSTELNEAIDQANPGDEIIMANGDWNDVQIRFLGYGKEGQPITLKAETPGKVFIGGKSDLKLGGEYLVVNGLYFINGa 118
1DBG_A        28 VASNETLYQVVKEVKPGGLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGDAKVELRGEHLILEGIWFKDG- 106 Pedobacter hepa...
7O78_A        85 --NRNVNQWKSHGPGLvaiyGSYNRVTGCVFNAFDEANSAYITTSLTEEGKvpkHCRIDHCVFTDKITFDQVI------- 155 Pseudopedobacte...
WP_013188043 112 tpTKTLIRFKINDEKI----ANHCKFINNAIVEFTQPDRDDTDHWIELWGR---HNSVSNNYISGKSNFGPTVmvmlkgn 184 Croceibacter at...
WP_038528726 110 tpKSTIIDFRTDNESV----ANHSKITNCVIEGFTQPDREEKDNWVQFYGR---HNELSNCYIAGKSNPGPTLriylngn 182 Formosa agariphila
WP_015481700 106 spKKNVIAFRTSPKDV----ANHSSVTNCVILDFNNLERDQDNLWVQFYGK---HNELSNCYLAGKTNGGPTVrvdlkgn 178 Polaribacter sp...
CAZ98265     119 spSNAVIEFAINEDTV----ANHSRITNSVILDFNKAQRNETDLWVLFKGR---HNQLDHCYIAGKSNRGPTVridlagn 191
1DBG_A       107 --NRAIQAWKSHGPGLvaiyGSYNRITACVFDCFDEANSAYITTSLTEDGKvpqHCRIDHCSFTDKITFDQVI------- 177 Pedobacter hepa...
7O78_A       156 -NLNNrpradkeskvlgeamYHRIDHCFF-SNPPKPGNAGGGIRVG--YYRNDIGRCLIDSNLFVRQDSEAEIVTSKSQE 231 Pseudopedobacte...
WP_013188043 185 qHIKN---------------YHQIVNNHFgPRPRKGGPHGETMQIGdsGTSMTPSHTNVANNLFERCNGEVEIISSKSNN 249 Croceibacter at...
WP_038528726 183 eNINN---------------HHKIINNYFgERPRAGGPHGETIQLGdsYTSMTPSYTQVSNNLFERCNGEVEIISSKSNF 247 Formosa agariphila
WP_015481700 179 qSIRN---------------YHKIVNNHFgPRPRKGGARGETIQLGssFTSMSPSNTTIANNLFEECNGEVEIISSKTNF 243 Polaribacter sp...
CAZ98265     192 qNIKN---------------YHKINNNYFgPRPPKGGPSAETIQLGnsYTSMTPSHTLVAHNFFDRCNGEVEVISSKSNF 256
1DBG_A       178 -NLNNtaraikdgsvggpgmYHRVDHCFF-SNPQKPGNAGGGIRIG--YYRNDIGRCLVDSNLFMRQDSEAEIITSKSQE 253 Pedobacter hepa...
7O78_A       232 NVYYGNTILNCQGTLNFRHGDKQVALNNFFISTDNKYGYGGMFVWGSQHIIANNYFNLKKTIKARGNAALYLN-PGPEGS 310 Pseudopedobacte...
WP_013188043 250 NVFENNVFFESEGSLVLRHGNYATINRNIFIGNDNSPFIGGIRVINTGHWITNNYFYKLKGETFRAPLAVMNGiPKSPLN 329 Croceibacter at...
WP_038528726 248 NEFTNNIFFESEGSLVLRHGNYAKVDGNVFIGNENSTAIGGVRVVNTGHWVTNNYFYKIIGSDFRSAIAVMNGiPKSPLN 327 Formosa agariphila
WP_015481700 244 NIIKNNVFYKSEGSVVTRHGNYVSVDGNYFIGDGVNENYGGIRIINTGHWVTNNLFYKIKGKNFRSPIAIMNGiPKSPLN 323 Polaribacter sp...
CAZ98265     257 NEFRNNVFYKSEGSLVTRHGNYCIIDGNYFIGDTNSEQIGGVRLIGTGHWVTNNYFYNLKGKTFRSPLAVMNGiPKSPLN 336
1DBG_A       254 NVYYGNTYLNCQGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWGSRHVIACNYFELSETIKSRGNAALYLN-PGAMAS 332 Pedobacter hepa...
7O78_A       311 EHALAFNSLIVNNFFDDNN-------GYDINfepllerRKEFAKEVNAEFKLPYNITIEGNLFASkqGDKHIPFLGNLD- 382 Pseudopedobacte...
WP_013188043 330 RYNQVTDAVIAHNTFIKTEtpfhfsvGSNVS-------QSAVLPKSEIRSARPLRTTVANNFMYK--VSTSDLIKAYDTi 400 Croceibacter at...
WP_038528726 328 RYNQVTDVVIAYNSFIDCIsplqfsvGNNSD-------KSDVLPATELRSARPTRTIVANNLIYNhdVNETKPIFAYDEv 400 Formosa agariphila
WP_015481700 324 RYNQVTDVVVAYNTFVDSDspfqfgvGTNIA-------QADVLPKSEIRSARPLRTEVVNNVIYNa-EGDTTPIVEHDKa 395 Polaribacter sp...
CAZ98265     337 RYIQVTDVVVVHNTWVNCTsplqfgvGSNVD-------QKDILPASEIRSERPIRTIVANNLIYSd-KGDKQPVVAHDSl 408
1DBG_A       333 EHALAFDMLIANNAFINVN-------GYAIHfnplderRKEYCAANRLKFETPHQLMLKGNLFFKd-KPYVYPFFKDDYf 404 Pedobacter hepa...
7O78_A       383 -----KNNLQNNYSFGQMANDKLFTN----VKPTTDGsynpqSYKgyQLANVKDIknIEGIDLD 437 Pseudopedobacter saltans DSM 12145
WP_013188043 401 dgvnfKNNVVAIENQKVKLPEGFLQSkv-sVVKKGNF-----LYV--PTETDRNI--FNGFDFE 454 Croceibacter atlanticus
WP_038528726 401 dgvsfYNNILNTNDVSGIDTNGGLTQedftVNKVTDW-----FYT--PSKSFSDV--YNGFDFE 455 Formosa agariphila
WP_015481700 396 dgvtfKSNVIDNNGVAIANDKGLIVKdl-tLTDIGSN-----LAA--PVSGFKDVepYNGFDFE 451 Polaribacter sp. MED152
CAZ98265     409 dgirfRNNLINNQGLSFRKLPGVETKdf-sLSELEEN-----VLI--PANDLSGSalYKGFEFD 464
1DBG_A       405 i--agKNSWTGNVALG--VEKGIPVN----------IsanrsAYK--PVK-IKDIqpIEGIALD 451 Pedobacter heparinus
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