Conserved Protein Domain Family
TRP_N

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pfam14558: TRP_N (This model is not part of the current CDD release)
ML-like domain
This domain is distantly similar to pfam02221 and conserves its pattern of conserved cysteines. This suggests that this domain may be involved in lipid binding.
Statistics
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PSSM-Id: 494361
Aligned: 205 rows
Threshold Bit Score: 43.26
Created: 22-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_008595368  112 AVRVPFTNCldekyITDgKl--------QWKPVYADASFd-tTDPTHelkvVVWGNVTGFqdpknlppsaqddpnr---- 178 
CCU78772       59 AAFVEFRNCllqntIHD-Epl-----alQLVPKFVNIFLn-nSNPDHnlnvTVWFNVTGStagtepklslppasntsywn 131 
XP_001594424   71 AVFIEFSNCleesyQGN-Tpy-----qlQFVPYFLWAVFn-tTDSTHnlalQVFGDVKGSgpgpsisipplsndtaywqs 143 
XP_003857797   20 AVFVNFENClpdstRNS-Rpq-----qlQFTPLFVDATFv-nERSTHflnlTIYGNVSGQqftgnypppsdeqwn----- 87  
EOD48596       26 AAFIRFENCldpaiIHS-Dpk-----rlQFTPYYLNARFn-tSAESHnlniTIYGNVSGQatqgtlpawdnetywn---- 94  
XP_015700465   93 AAFVQFENC-----LPQ-SiihsnplqlQFEPMFVWAEFn-lTSEAKnlnvTVYGNVTGIatqepypppnspsw------ 159 
Q5ARD4         73 AALLEFENCldesiVDS-Spr-----qlQFVPLDVWVTLn-mTNSLYpldvIVYGNVTGTanrsaeypapddpqwd---- 141  Aspergillus n...
XP_003710874  150 AVNIAFDNCldsryTSG-Npp-----glQFVGIYVDAILsvgNDSSQnlkvTMWGNVTGSrsrkalppasdtgyws---- 219 
1_pfamImport    1 AVLVPFENClpkyyMES-Kpt-----plQWVPEFVDATLn-vTNDVQslkvTMWGNVTGSrrdqplppasnttywk---- 69  
XP_009225759  163 AVLIPFENClpkyyVDN-Kpt-----alQWLPKFVDATLn-vTNDIQslkvTMWGNVAGSrrdqplppasnitywn---- 231 
XP_008595368  179 -lywkdngktngkitqTGDTGKaTTLYRRVNVLTYRPV-NERVNFCTEAlDGGQCPLGPFlntsRVDFP--DDLftrprs 254 
CCU78772      132 sndtgmggkieavplsET-VNKqTTLENKLNILNYQLV-DEYLPFCDII-VNGFCPLGPIfgtnNTRNPspSEF------ 202 
XP_001594424  144 nssdtyngkiadepdpA--SQKlTTLSNKVTVLTYEPF-NEYVDFCQQL-VNGTCPLGPSfnasRWn---pFTF------ 210 
XP_003857797   88 -nsdvsfgkivnvgtgN----RlATLTADYMVLTYTEAnNPGERFCDAL-VRGDCPLGPAf---YANASvpSEL------ 152 
EOD48596       95 -npnetfgkivdlstsN---NKySTLFAKAQVVTYTPWeADPARFCQAT-VNTSCPIAPVf---DANRTdpYSL------ 160 
XP_015700465  160 ---snpentvgkivdvDAQNNMlSTIFTRFEFLSYTPYvAPPARFCDSL-VQGQCPLGPVf---FSNGTp-pEL------ 225 
Q5ARD4        142 -npnstfgkiidldvdN---NNySTLIASIQVASFTPYs-EPSRFCDSV-TQGDCPLGPVf---YVNETdlSTL------ 206  Aspergillus n...
XP_003710874  220 -dpaktegkivnlpsqQGTTTYvTTTHSKIDVLTYEPW-NNDADFCKNLgGGYSCPLGPnf--nPNATR--NQL------ 287 
1_pfamImport   70 -drdqtdgkiqaipdsQ--KNIiTTLHSKINVLTYEPW-SGDFDFCGNLsKPFTCPLGPVfdfnPASRR--DSL------ 137 
XP_009225759  232 -dpkqttgkiqqipnsNPPRIs-TTLNSKINVLTYEPW-SGNFDFCENLsKPHTCPLGPVfnfnTTSPR--DIL------ 300 
XP_008595368  255 lssfSSMnlthqfgsSYSFSSFSSTLLLLSSdeAatNIGCISSIITPDLGS 305 
CCU78772      203 ----PSFgfsrylrsTYAFTTLTATFKVRYGdtQatEIGCVSVNITPEIGF 249 
XP_001594424  211 ----PSFgfrnnfysSYAFTSFSATMVIKNGdtAatSIGCISADITPDIGS 257 
XP_003857797  153 ----PAFflshdfgtSYSFSTISATAHIISGdeGapNVACVSAQITPDLGS 199 
EOD48596      161 ----PAFtvahdffsTYAFTTFATTIRVQSGddGapDLACVSANITPDLGS 207 
XP_015700465  226 ----RAFsvshdlfsSYAFTTITPLITVTSGnaArsLVVCVSADVTPSLGS 272 
Q5ARD4        207 ----RAFsvhhdmvsSYHFSTLHTTFTIISGdaAadRLGCISVSITPDLGS 253  Aspergillus nidulans
XP_003710874  288 ----PSVsmannfttSYAFTSWSATFLIKYTdsElvNIGCVSATITPDLGP 334 
1_pfamImport  138 ----PSVflannfttSYAFTSWSATFLIKYTdnDllNIGCVSATITPDLGS 184 
XP_009225759  301 ----PSVsmannfttSYAFTSWSATFLIKYTdsEvvNIGCVSATITPDLGS 347 
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