3CO5


Conserved Protein Domain Family
Sigma54_activ_2

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pfam14532: Sigma54_activ_2 
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Sigma-54 interaction domain
Statistics
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PSSM-Id: 434021
Aligned: 10 rows
Threshold Bit Score: 155.193
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3CO5_A           7 LGNSAAIQEXNREVEAAA--KRTSPVFLTGEAGSPFETVARYFHKNGTPWVSPARVEYLI---D---XP--------XEL 70  Neisseria gon...
1_pfamImport     1 VGAGRAIQRFTEHLEVAV--RSHFPVYIAGEFGTDPSSVAGALHVFRCGVDAPFVEIRGA---HpegSP--------AEW 67 
WP_013441016   136 LGKSPVISELRQRLEQIA--GVKSPLLLIGEQGSGAELCAKFLHNPDTPWLSLTDYEQLA---T---AP--------LDI 199 Methylovorus
Q3SMR9         137 LGRSTLIAELKKRLAQIA--GNTAPVLLLGEAGSGFEICAQFLHQPASPWIEIKDRARLV---S---DP--------LSF 200 Thiobacillus ...
Q5F5Q1         136 LGNSAAIQEMNREVEAAA--KRTSPVFLTGEAGSPFETVARYFHKNGTPWVSPARVEYLI---D---MP--------MEL 199 Neisseria gon...
jgi:Plabr_3632 167 VAASLPMQRIASQIALAR--QAMLPVHITGPQGAGKLYCSQLLCHQPGRDSLPVVM-YCG---L---LPhseqrrllKDL 237
WP_014244124   322 FGSTQKSSAIRTTLKKLK--YGKTNVFIVGEKGLGKEFFAKYLSNNSEK--DIFNCKDPAhleK---IL--------SST 386 Halobacteriov...
Q8FA24           9 IGNASNSIKIFNRLKSLS--QSNLPLFVTGGPGSGKTFVSNLIASLSGTNPQIFIIDSDH---H---EN--------QRS 72  Leptospira in...
Q2YC24         152 LGRGALITDLKRRLEQVA--SLTAPVLLISEPGTGVDLCARFLHEPNTPWVEPDTLATLS---N---AP--------FEL 215 Nitrosospira ...
WP_013146921   136 LGKSPIVTALKDRLDKIAvgISPTPVLLIGPKGCGAELCARYLQDSGSPWLQLTDFNKLV---D---MP--------LDI 201 Methylotenera...
3CO5_A          71 LQK----A----EGGVLYVGDIAQYSRNIQTGITFIIGK---------AE-RCRVRVIASCSYAAGS--DGISCEEKLAG 130 Neisseria gon...
1_pfamImport    68 FAR----A----KGGTLYINGIQDMDPALLCELPGYLPSrlgqwasspAK-GESCHLVSSGLARAEQlmEAPALPRALMA 138
WP_013441016   200 LEQ----V----QEGMLFIPEVADLSKNQQKGLQLLLAR---------AD-KYGARVVCVTAKSLPQlvVAGRFDNLLLQ 261 Methylovorus
Q3SMR9         201 VET----L----GNGTLYLPEVCELGRLEQKGLGLLLDR---------IE-GSGARLVCASSRSLDAmvAAGEFDSRLFY 262 Thiobacillus ...
Q5F5Q1         200 LQK----A----EGGVLYVGDIAQYSRNIQTGITFIIGK---------AE-RCRVRVIASCSYAAGS--DGISCEEKLAG 259 Neisseria gon...
jgi:Plabr_3632 238 LDQdaepA----LPAGLVLKDVEKLSADLQKQLAERLAA---------GEwPSRLRLVSTSCLDVTAlaASNNFNAQLAF 304
WP_014244124   387 SNF----S----SEQTLIFKNIDSLSSSDQSRLYNWIQF---------Q----DCKFITTSCKDLIYeiKSGLFHKQLYK 445 Halobacteriov...
Q8FA24          73 LES----AlsvkDNVYFLFKDFPNFPKENQAYLLKRIRE---------N--QNNSRFVFISGKEWKQklEAGQILESLYF 137 Leptospira in...
Q2YC24         216 LEQ----A----KGGLLFLKEIDELNKLAQKGLLLLLGK---------LE-RYSVRLVCVTSTPLASlaAQGVYDPKLYE 277 Nitrosospira ...
WP_013146921   202 LES----I----RGGILYIPEIADLKKAEQKGLLLLIAK---------SE-KYHVRVVCGTSENLPKlqAESLFDHNLFQ 263 Methylotenera...
3CO5_A         131 LFSESVVRIPPL 142 Neisseria gonorrhoeae FA 1090
1_pfamImport   139 ELSLVELHVPPL 150
WP_013441016   262 SISATSLRIPNL 273 Methylovorus
Q3SMR9         263 RLSSLAIQVPPL 274 Thiobacillus denitrificans ATCC 25259
Q5F5Q1         260 LFSESVVRIPPL 271 Neisseria gonorrhoeae FA 1090
jgi:Plabr_3632 305 QLTPLTVHMPGL 316
WP_014244124   446 KLTQSRFHLTPL 457 Halobacteriovorax marinus
Q8FA24         138 EISNFRLDLPDL 149 Leptospira interrogans
Q2YC24         278 MLSGLCINVPAL 289 Nitrosospira multiformis ATCC 25196
WP_013146921   264 ALSAVSLRVPAL 275 Methylotenera versatilis
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