Conserved Protein Domain Family
Exo_endo_phos_2

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pfam14529: Exo_endo_phos_2 
Endonuclease-reverse transcriptase
This domain represents the endonuclease region of retrotransposons from a range of bacteria, archaea and eukaryotes. These are enzymes largely from class EC:2.7.7.49.
Statistics
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PSSM-Id: 494340
Aligned: 65 rows
Threshold Bit Score: 70.0725
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002488631 118 FLIFSVYIPPLDvhqatsttstksALKEIENTIEQHTRESNKStRLILVGDFNRHHPTWSH--RSishvftAQAEELINF 195 
EFO87533      36 TRIIVCYHPCHNd-----------DMSLLIEALKYLLSSHT---NVFLCGDFNMPHVNWESlsASd-----KKCNEFLTF 96  
1_pfamImport   1 VRFILVYRPPDTsn---------iQTHNLVDQLNTLMACPKM--SYVLLGDFNLPGIQWAHhsR-------VDNTGLTDM 62  
EFP11644     375 FTFCLVYRPPDTsr---------sQNAALIAHLDQFLPLN----CCLLAGDFNYPSLKWDSp---------HTSHEFLSF 432 
EFO96901      30 FNFFLVYRPPDAss---------aQSLALIDHLDEYLPLK----SCILAGDFNYPSLTWNPp---------SSNHPFSLF 87  
EEC14949      39 LYVLNVYSSPKD------------QSREVTALLESTTQLAKKG-QLVITGDFNAPHVEWGYhkSF------KKGNILWNK 99  
EFA13629     106 ITFFTYYNSPRQ---------------CLSNELMQYAASLP---KAIILGDFNARHTDFGDtlTN------RNGHILIDA 161 
EFA05655     101 ILFISYYNPPLE---------------TVNAQLLDYTSTFT---HAVILGDFNARHTDFGNtiSN------TNDRHLIRS 156 
EDS25808     467 VLFIAAYCPRQVnsr-------dgSAAKLKSDIQKLTRRSA---KYIIAGDLNAKHEVWGNsrRN------RNGVILHND 530 
EFA12510     220 LRLFACYNRPQI--------------PILEEDLQTLFDGNT---PTIAAGDFNAKHINWGSrrSN------RNGNILNGF 276 
XP_002488631 196 FQEYQLQ--WCLPPGtPTYwspshpgkT-LVLDLTLTNDPTTLIk--cQLYHDNYGLDHRGTY 253 
EFO87533      97 VLNSGLT--QYVHEP-TRLh------pD-HILDLVLTNTPIIHD-----VVVGELFSDHRLIK 144 
1_pfamImport  63 TESHNMI--QLVKSA-TRIsqh---gtE-NILDLIFSSNPKACFn--vEVSEPLMMSDHNSVH 116 
EFP11644     433 INSKGLF--QHVKFP-TRSss----ssA-NILDLVITSKDLPVAk--lSQHPPLLNSDHFSVE 485 
EFO96901      88 LQSKGLY--QNVTFP-TRTsa----tsS-NILDLVLSSPDIAIPh--iSKEPTLLNSDHFSVD 140 
EEC14949     100 IQELGLSllNDPHTA-TRTgns--isrD-TTPDLTLAKNVKNPVw---RNTGADLNSDHYILA 155 
EFA13629     162 ISNLPLY--RIPNSS-PTHinh--wegY-SIVDHILVTDSLSNRasdsANIGTTITSDHLPLV 218 
EFA05655     157 LNTLPLC--RLRNQF-PTLvny---sgT-SIVDHIIVTDNLTHItntdSFIGTTVTSDHLPLV 212 
EDS25808     531 LQNGYYNvvSPDR---PTRvar--sgnH-SIIDFFITNMAENVAh---PEVFEELSSDHYPVV 584 
EFA12510     277 TDQHLDI--SVMAPVePTFyrn--sdgTaDILDVAIVKNVVHQVr---LTAINDLSSDHNPVL 332 
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