Conserved Protein Domain Family
YhfZ_C

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pfam14503: YhfZ_C (This model is not part of the current CDD release)
YhfZ C-terminal domain
This domain is often found in association with the helix-turn-helix domain HTH_41 (pfam14502). It includes YhfZ proteins from Escherichia coli and Shigella flexneri.
Statistics
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PSSM-Id: 494317
Aligned: 13 rows
Threshold Bit Score: 289.21
Created: 22-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013779081       79 KLWDVAGLGSVTGAMPLPYSRRYEGLATGIYKAFEKSGIPFNMAYMRGGYKRLEALEQ--SKYDFIIISKLAADMGVLSG 156 Tepidanaer...
CeBiTec:AFR_33885  71 QLWNAAALGNFRLILPPQGPVEQQGILEVVQAALHDVGVSVVAAFRPGARTRLEDVYQ--ERFHATVTSAGALDRHRENL 148
2_pfamImport        2 ELWKFLSKRYVVGLFPEPLSLEMRGLAMGLREVMDDLDIPLVIVYGYGSKVRFDRIVNrpTREDFVISSLESARHRQKAD 81 
WP_012859846       79 KLLNYAGISTVVCVMPLPYSKRYEGLATGLKKCFSDKKIPFYFAHMGGADIRINFLEK--GLYDFAIVSKLAANQAIKSG 156 Sebaldella...
Q6LNG6             78 KIVRLAGLGHVVCAMPLPYIKHSEGLASGLKAQMSS--LPLYFAHMRGAGVRAKLLSS--GVHDIAIMSKLAAQSYSDG- 152 Photobacte...
WP_002440431       77 ALLRYADIPALVCAMPLPYTKKYEGLATGLRQAFSG--VPFWFAHMSGADVRVECLCN--GLYDMAVMSRLAAEYYCAAP 152 Shimwellia...
Q7N5F8             78 ALLAHADISNVVCAMPLPYTRLYEGLASGLKAQFEG--IPFYFAHMRGSDARVECLRK--GIYDLAVVSHLAAQTYLEQG 153 Photorhabd...
1_pfamImport        4 TLLSHVDISNVVCAMPLPYTRLYEGLASGLKAQFEG--IPFYYAHMRGADIRVECLLN--GVYDMAVVSRLAAESYLAQN 79 
Q65MR0             78 LLLEIAGIAPLIGSMPLPYSRKYEGLATGIVEGFESTGKTVNLIYMRGGVNRIEAVRT--KRSDFAIVSKMTADHIIAEY 155 Bacillus l...
Q5WK95             78 KLLEFAGVNTITAVMPLPYSKKYEGLATALTTVFHNMGIRLNLAFMRGSNPRLEGVKE--GRYDFAVVSFMAAKNAVEKA 155 Bacillus c...
Q9KF99             78 KLLQYSGLERIIGVMPLPYSKKYEGLATGMTAQFEQLSIPLNMAFMQGAHPRLEGVKE--GRYDFAIVSKFSALHELNNN 155 Bacillus h...
Q67S01             47 KLREIAGLASLLGLMPLPYTRRYEGLASGLYEAVRQSDLPFSIGYMRGARNRIAALHR--GQADFAVLSRLSAELAVAEG 124 Symbiobact...
BAM01016           73 RLWQLGYQRPVVGALPLPYSRHVEGLATALHAQFAEAGVELTLRFMRGSSQRLQALAQ--GAVDWALLSRFAAETAHAHG 150
WP_013779081      157 K-DIEmVIDFGNYSYVKDHKVLFANPEDSEIRD--GMRVALDKSSPDHFILTTYECEGK-EVKYVELTYNQILKSLLDKK 232 Tepidanaer...
CeBiTec:AFR_33885 149 P-GLS-GLDLGPGTFYSNGSLVVVEHAGRKPQG--RLRVGIDRNSDDHQRLSEAEFGDR-DPEYVQCPFVLAPAAVLAGD 223
2_pfamImport       82 E-ALAvSLRFGANSFYAADSLVILDNIRSEDKEmrKKIVGIDYNSYDHMLLTQAAFP---DADYVNVRYGEIPFESLSGK 157
WP_012859846      157 K-KIEiAYEFGENTYVDKHVLF--KNENTVIK-----KVGIDPDSKDQYLLTKDYFKGNdDIELVKINYNKIPELLKRGI 228 Sebaldella...
Q6LNG6            153 ---LTvAVNLGKNSYSHDHRVIYRKGEYGGIR-----RVGVDSDSPDQQILTKQAFPDQ-DIDIVEINYGDSLIHLASRN 223 Photobacte...
WP_002440431      153 DcRVEiAILSGPDT-CARHGVIRRQGDKGPVK-----RVALDSRSLDQRILTREQFPRE-AVDYIEISYHHCLHSLAQGM 225 Shimwellia...
Q7N5F8            154 D--VCtVLELGPHTYVGAHQLIYRKGGEHNIR-----RVGLDHRSADQKIMTEVYFAGQ-DITLVDISYHESLYKVAKGD 225 Photorhabd...
1_pfamImport       80 G--LRiALELGPHTYVGEHQLICRKGESDRVK-----RVGLDNRSADQKIMTEACFGKS-DVELIDLSYHESLQRIVKGD 151
Q65MR0            156 P-NLKiFKKFGESSYVSSHKIFLAHPDEEIGKD--GVRVGVDLESLDQKQLTLAEFENK-NAEFVNVNYMQLFDMLLSKQ 231 Bacillus l...
Q5WK95            156 N--ITiEKRLGAQSYVSKHKIYFADSDKTEIED--GMRIGIDSKSADQRTLAEAEAQGK-KVTFVETTYMHLLQSLEAGL 230 Bacillus c...
Q9KF99            156 E-GVMlSLSFGPQTYLSSHAVIFSDEKAKQIED--GMKIGVDKNSLDQQILTNAEAEGK-KVEFVQLNYMHLLDHLKANT 231 Bacillus h...
Q67S01            125 G--VViVMGLGPQTFVSQHGILLARPEYTGITD--GMRVGIDPQTLDQAWLTAAECRGR-QVELVEIPYSHLLQRLREGQ 199 Symbiobact...
BAM01016          151 F-TATmVLALGAYTYLAGHVLLLRDPMTHTLRD--GHRLGVDFLSADHTYISRAVSRGK-HVELVSIQYDQALELLAAGA 226
WP_013779081      233 VDAAIWNID-EIEDR-NLSISYFDLKNLKAVKLKEDNTKAVLVTKKSEWGLRDILRNvIDKQYVIEIQKKVLEGKMLPNY 310 Tepidanaer...
CeBiTec:AFR_33885 224 VDVAVWHSMpTVIPPeLAGLRLSPLATAPGRAVVGQISPAVIVTRTLDPGVNALLRQ-VKPADVARTQSRLLKVAATESY 302
2_pfamImport      158 MDTVVWHQT-TPVHFpEDMIKARKFESVIPDFDIDSICEAVLSINRNNRLMTGIMES-IDVEKVIDIQKKVLNRELEP-- 233
WP_012859846      229 IDATVWNLD-EIKEQ----NMNIQYEELKNKTQVNLANEAVLVVKQNDSALKNIADKvIEREFILQMQKDILEDKLYPSY 303 Sebaldella...
Q6LNG6            224 IDAVIWLTE-----AiDMDNVGLAEKSLNHIPQCEMASEAVLLVRNEAPHIKALLRNlINKDALNSHQKKVVTGEITPSY 298 Photobacte...
WP_002440431      226 VDAVVWNTE----DPdSIALRGLSATPLAPSDFVRSAAEAAVVIRKGDATTRQLLSTfVDVSQVVACQQQVIRGECDPRY 301 Shimwellia...
Q7N5F8            226 IDAVIWNVS----REvELSSRELIAVPLSGSACFTRASEAVILTRADDILMQQLLRTmVNTTELLVHQQRVLAGQQDPSY 301 Photorhabd...
1_pfamImport      152 VDAVIWNVV----AEaELALLGLEATPLTRDPRFLQATEAVVLTRSDDYPMQQLLRAvVDKQALLAHQQRVVSGEQEPSY 227
Q65MR0            232 IDAAVWNAD---DKRmIQTFKAIDFFSPKAKKISKDTTEAVIVIEGDREKEIAEKWNlVNEKQILDTQKSVEKGEKIPRY 308 Bacillus l...
Q5WK95            231 IDATVWNAD-EVQRP---TLYAKELTSSLAVRNSQEISETALVAHGDKQTISYLL-GlIDKQELLTIQKQVVEGKIIPSY 305 Bacillus c...
Q9KF99            232 IDATVWNID-EIGVT---PFNVQPLTSETALSYETEMTEAVVVIREDNKKLDYIL-NlLSLPTISEVQAKVENGDLIPKY 306 Bacillus h...
Q67S01            200 IDAAIWNLD-ELSSG-TMEIYSRPLQSPEARRIAESSSEAVLVIDANRPDLERLLPEiIDPALVRRVQDEVLEGKRIPSY 277 Symbiobact...
BAM01016          227 IDAVVWT---DLNTPaLPDNITITPLTTDDDPMLSALSEAVLVVDPARPASAHLLQAlLDVPALLEIQNEVIHRTRIPSY 303
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