Conserved Protein Domain Family
RTC4

?
pfam14474: RTC4 (This model is not part of the current CDD release)
RTC4-like domain
This presumed domain is found in the RTC4 protein from yeasts. In Saccharomyces cerevisiae, Cdc13 binds telomeric DNA to recruit telomerase and to "cap" chromosome ends. RTC4 was identified in a screen to identify novel proteins and pathways that cap telomeres, or that respond to uncapped telomeres. This domain is also found in proteins that contain a DNA-binding myb domain.
Statistics
?
PSSM-Id: 521218
Aligned: 95 rows
Threshold Bit Score: 90.7072
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_022464976 220 KGKVI-SPYYNDAKSVFQKSKRPFVTAEELSaldvhdfTAGFYGLKRQICIGNEILQKFGDQLSN--HPSPTIKWWGVKD 296
CCE86986     232 sdfKKcSMFYDRAEMQARSSSNETLSASDRNtidwnsyFGGYFGFKRQLFISSVIFSLRKKELLQaaKKYPVVSFWTIDG 311
XP_006687590 195 KGTKPmSYFYDLAKESRMAAPHETMRQRDKYnirweifYGGYYGLKRQMYVASVILDTYRDLITKtsSKNATVAFWGPED 274
XP_001484000 224 TQKKG-SSFYNSAKNISNQSLHDTMTSKEKSeidwtifYGGYYGLKRQLFIGNIIVSQLHDELRTsaGNCREISYWTING 302
XP_002551056 215 EQKQEpSSYYYLARKQCYKSKHETMSAQEKWsiewesyFGGYYGFQRQSIIGSYILEKYENKLLKfsNGNKTVSYWTVPQ 294
EMG46324     219 SGKIGtSCYYELAKKQCMESPHETMSNSDKFkikwdkyFGGYYGFQRQSIIGNYIMDKLESKLIKfsNKNRTASYWNISQ 298
XP_007375249 201 RGKLPpSFYYDLAKKQRDKSIHETMGGTEKFqinwesfYGGYYGLKRQSIIGTLISNRFQQELKRsaNTNRTVSYWTIPR 280
XP_011275921 357 SGKLD-SPYYAEASDIAKESPSTHLSSSEFLrlpishfTIGFYGVKRQAIIASIIKQHYQKDLEKaqLINKTMKFWSLDS 435
XP_002491887 174 NGSKP-SYFYSLAYEVSKSSKNRVLTKNVLEnidmtkfEVGYLGMKRAGIISDFIRSKYRTLLSElgKSNPVIQFWSVDM 252
XP_013932343 174 NGKTA-SYFYEIAREYAESSPRLFVTDSEIInlpk-qryHGYIGSMRADAITQHLLSQ-LDQLLTdkKANKVLQFWGRSY 250
XP_022464976 297 FATYVLAPEVLALLAIEELKQFSsvystvlvhakkrpltdfewqelenarFAATEVFDATADYGLQVTD 365
CCE86986     312 FCTYILANELILKFIMQDFRCSL---------------------------DDAKNTLCDSVDYGLYVTD 353
XP_006687590 275 FCKYVLANEIILRFIMEDYECSF---------------------------SRAEEIIKETSEYGTSVTD 316
XP_001484000 303 FSSFVLANEVILSMIMEDFKCDR---------------------------EKAENIARETVDYGKAITD 344
XP_002551056 295 FSTYVLANEIIIRMIMEDMNMDF---------------------------KEAETFCQKTTDYGTMVAD 336
EMG46324     299 FSTYVLANEIIIRLIMEDMELDF---------------------------DAAESFCQQTTDYGIIVAD 340
XP_007375249 281 FCTYVLANEILIRMVMEDMKCDF---------------------------EKAEEIISATTDYGIVVAD 322
XP_011275921 436 FVLYVLSCEVAVRMAAKDLKISA---------------------------GEALDILEETVDYGKYITD 477
XP_002491887 253 FVTCALTPEVISRYIKEEMKLSDl--------------------------SDAYDLMEWTSDYGKYIMD 295
XP_013932343 251 FTRFVLTPEIIARIVKQDEQVDL---------------------------DKAYDLMESTADYGLYIMD 292
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap