Conserved Protein Domain Family
Prok-E2_D

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pfam14460: Prok-E2_D 
Prokaryotic E2 family D
A member of the E2/UBC superfamily of proteins found in several bacteria. Members of this family lack the conserved histidine of the classical E2-fold. However, they have an absolutely conserved histidine carboxyl-terminal to the conserved cysteine. Members of this family are usually present in a conserved gene neighborhood with genes encoding members of the Ub modification pathway such as the E1, Ub and JAB proteins. These neighborhoods also contain a gene encoding a rapidly diverging alpha-helical protein.
Statistics
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PSSM-Id: 494284
Aligned: 14 rows
Threshold Bit Score: 193.362
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q11ZD1         58 KNLKLLaqqAQQGLKQDFEVIPANVLV----ANDSLLAWWMPKGTQLMSFDVSmhelagksrLQGVSGNVPTPALVFAMM 133 Polaromonas sp...
1_pfamImport    4 SLVESY---SDGNRRIPHGWLPPNMLWcdtrRGHESYVWYNPPGKRRMFFKND---------LNIGDGMFHVPGVIYIIK 71 
2_pfamImport    4 SLVESY---TDDRRNVPHGKIPANMLWcdtrKGHERYIWYNPPGKRRMFFAGS---------LNIPDGTFHVPGVIYKVS 71 
Q8A4F1         59 SLVESY---TESMSGIPHGRIPGNMLLcdsrKGRERYIWYNPPQKRKMYFQDG---------LHITDGTFNVPGVIYVVE 126 Bacteroides th...
WP_015186491   57 FISPAAlreAFVAEPIDSGYLPPNTVRwgrcYKGEWLVQFYPPQSCCISLENT-------------TLTVPMPGLVFAGC 123 Cylindrospermu...
3_pfamImport    4 ELMGSQ----------NLFYLEERVLA----YNGSTFIVWLPPKPRKVYFDAPe-------pMGKREGITPHPGLVFAIY 62 
Q5NXB4         57 KMFDSL----DPSRSARPVFLEPNVLS----QGPGWLVWWMKPQTRRVWFESKe--------IKLETAEVPHPGLVFAVT 120 Aromatoleum ar...
jgi:Galf_0968  62 KMMQTL----VPEDCAPAQLLGDHILA----KGSDHLAWYCKPQKRQVWFKNDe-------lGQDVSATTDHPGLVFIIG 126
Q21Q52         59 SLMAALrqlARQQGISDLVWVDDQTIA----TSSTLQVWWTPAQSRWMHFQSQ---------GLQLSLPAQNPPLVWLAC 125 Rhodoferax fer...
WP_011797951   68 ELVTGL---SQSQSLSVPSWIDTTMLA----LGAGRMIWYTPACQRAMFFKTSsft----kdTFEAQGQLPTPGLVWLVM 136 Polaromonas na...
Q11ZD1        134 RNRnaggafegLYVFALEKsERPTSDTSLYRAPLLNVg-EDGSVCWGDG--VKPAGKTVKD-ISAWQALFFSSVFTHyng 209 Polaromonas sp...
1_pfamImport   72 NER--------MDIFAYKG-KKPDGRTPLYLAPFFNV--TGGNVCLGNStlEKPESLDFHTlLEYWEKRFWLSEFSH--- 137
2_pfamImport   72 GDR--------LDIFSYKG-EKPAENSPLFLAPFFNV--TGSSVCLGNAalTPPEDMTFSKlLEYWEKRFWLSEFSH--- 137
Q8A4F1        127 REC--------MDIHAFKG-AIPEERTELYLAPFFNV--AGANVCLGSSspKKPQDMDFLEfQEYWEKRFWMSEFSH--- 192 Bacteroides th...
WP_015186491  124 DRK--------YWIWAVKK---FDLNSPIFHAPLPNIm-ENGSICFGGN--SVPNCSAAHI-MQVWQ-LFWHSPFNQdlv 187 Cylindrospermu...
3_pfamImport   63 PGSd-------VRIFAVKGpQRPTPETKLYLAPYLNIygDNGSICMGNV--QAPDPSPDS--IDAWESAFFNSYFTHany 131
Q5NXB4        121 QEE--------WRVFAVQGrSRPRPGTKLYQAPYWNVw-KGGRICAGSA--RLPSAGLQAD-PSGWEESFFSSRFSHpni 188 Aromatoleum ar...
jgi:Galf_0968 127 KGH--------WYVFAVKGnERPTSGTPLFVSPYLNVw-KGGHICTGNI--ETPKGAMKFS-TEAWEEAFFRSYFTHpnq 194
Q21Q52        126 GEC--------LMVFALKEnIKPGPTTALHHAPLFNVf-ANAEVCAGSM--QKPKDGNAKE----WVESFYAATFTHanp 190 Rhodoferax fer...
WP_011797951  137 QGA--------LYVYAYKGsGRPDKETKLYQAPFFNVw-SQGKVCTGNA--AMPVGDNAAI-PHMWVDAFFGSNFTHpnf 204 Polaromonas na...
Q11ZD1        210 ------tvpIVGDDPYAFIADLMETEA---KEFPAAALKPM 241 Polaromonas sp. JS666
1_pfamImport  138 ---------LGGGKNPTRNNLVLVTERmreQPFDNDELQPI 169
2_pfamImport  138 ---------LGGSRNPTGSNLVSVTEKaraNPFDENELKPM 169
Q8A4F1        193 ---------LGGNRNPTRSNLVSVTEHarnNPFDYSELQQS 224 Bacteroides thetaiotaomicron
WP_015186491  188 -------qgKSKSYRENVRSHLQQLHNsnaKKYPTRDLVPW 221 Cylindrospermum stagnale
3_pfamImport  132 gi---rtsyPGGI--YSLWNDLLDGMH---TTFPEQVLV-- 162
Q5NXB4        189 hekdalvkyKGGS--AKFWNAMLSGKF---KSFPQEVLVPA 224 Aromatoleum aromaticum EbN1
jgi:Galf_0968 195 hekgaltkyRGGI--FALWRALMKG-----RAFPTKSLVSS 228
Q21Q52        191 psr-rlttyRQGE--KALWKHLMTSKKk--PAFPTDKLKPF 226 Rhodoferax ferrireducens T118
WP_011797951  205 kek---drlvkGVCPIDFWKAMTEKPL---PVFPEGRLVDL 239 Polaromonas naphthalenivorans
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