Conserved Protein Domain Family
Prok-E2_D

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pfam14460: Prok-E2_D (494284 is an unknown moldel)
Prokaryotic E2 family D
A member of the E2/UBC superfamily of proteins found in several bacteria. Members of this family lack the conserved histidine of the classical E2-fold. However, they have an absolutely conserved histidine carboxyl-terminal to the conserved cysteine. Members of this family are usually present in a conserved gene neighborhood with genes encoding members of the Ub modification pathway such as the E1, Ub and JAB proteins. These neighborhoods also contain a gene encoding a rapidly diverging alpha-helical protein.
Statistics
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PSSM-Id: 494284
Aligned: 14 rows
Threshold Bit Score: 193.362
Created: 22-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q11ZD1        58 KNLKLLaqqAQQGLKQDFEVIPANVLV----ANDSLLAWWMPKGTQLMSFDVSmhelagksrLQGVSGNVPTPALVFAMM 133 Polaromonas sp....
WP_005828792  59 SLVESY---SDGNRRIPHGWLPPNMLWcdtrRGHESYVWYNPPGKRRMFFKND---------LNIGDGMFHVPGVIYIIK 126 Bacteroidales
WP_011965215  59 SLVESY---TDDRRNVPHGKIPANMLWcdtrKGHERYIWYNPPGKRRMFFAGS---------LNIPDGTFHVPGVIYKVS 126 Bacteroidales
Q8A4F1        59 SLVESY---TESMSGIPHGRIPGNMLLcdsrKGRERYIWYNPPQKRKMYFQDG---------LHITDGTFNVPGVIYVVE 126 Bacteroides the...
WP_015186491  57 FISPAAlreAFVAEPIDSGYLPPNTVRwgrcYKGEWLVQFYPPQSCCISLENT-------------TLTVPMPGLVFAGC 123 Cylindrospermum...
WP_014003273  63 ELMGSQ----------NLFYLEERVLA----YNGSTFIVWLPPKPRKVYFDAPe-------pMGKREGITPHPGLVFAIY 121 Acidithiobacill...
Q5NXB4        57 KMFDSL----DPSRSARPVFLEPNVLS----QGPGWLVWWMKPQTRRVWFESKe--------IKLETAEVPHPGLVFAVT 120 Aromatoleum aro...
WP_013292939  62 KMMQTL----VPEDCAPAQLLGDHILA----KGSDHLAWYCKPQKRQVWFKNDe-------lGQDVSATTDHPGLVFIIG 126 Gallionella cap...
Q21Q52        59 SLMAALrqlARQQGISDLVWVDDQTIA----TSSTLQVWWTPAQSRWMHFQSQ---------GLQLSLPAQNPPLVWLAC 125 Rhodoferax ferr...
WP_011797951  68 ELVTGL---SQSQSLSVPSWIDTTMLA----LGAGRMIWYTPACQRAMFFKTSsft----kdTFEAQGQLPTPGLVWLVM 136 Polaromonas nap...
Q11ZD1       134 RNRnaggafegLYVFALEKsERPTSDTSLYRAPLLNVg-EDGSVCWGDG--VKPAGKTVKD-ISAWQALFFSSVFTHyng 209 Polaromonas sp....
WP_005828792 127 NER--------MDIFAYKG-KKPDGRTPLYLAPFFNV--TGGNVCLGNStlEKPESLDFHTlLEYWEKRFWLSEFSH--- 192 Bacteroidales
WP_011965215 127 GDR--------LDIFSYKG-EKPAENSPLFLAPFFNV--TGSSVCLGNAalTPPEDMTFSKlLEYWEKRFWLSEFSH--- 192 Bacteroidales
Q8A4F1       127 REC--------MDIHAFKG-AIPEERTELYLAPFFNV--AGANVCLGSSspKKPQDMDFLEfQEYWEKRFWMSEFSH--- 192 Bacteroides the...
WP_015186491 124 DRK--------YWIWAVKK---FDLNSPIFHAPLPNIm-ENGSICFGGN--SVPNCSAAHI-MQVWQ-LFWHSPFNQdlv 187 Cylindrospermum...
WP_014003273 122 PGSd-------VRIFAVKGpQRPTPETKLYLAPYLNIygDNGSICMGNV--QAPDPSPDS--IDAWESAFFNSYFTHany 190 Acidithiobacill...
Q5NXB4       121 QEE--------WRVFAVQGrSRPRPGTKLYQAPYWNVw-KGGRICAGSA--RLPSAGLQAD-PSGWEESFFSSRFSHpni 188 Aromatoleum aro...
WP_013292939 127 KGH--------WYVFAVKGnERPTSGTPLFVSPYLNVw-KGGHICTGNI--ETPKGAMKFS-TEAWEEAFFRSYFTHpnq 194 Gallionella cap...
Q21Q52       126 GEC--------LMVFALKEnIKPGPTTALHHAPLFNVf-ANAEVCAGSM--QKPKDGNAKE----WVESFYAATFTHanp 190 Rhodoferax ferr...
WP_011797951 137 QGA--------LYVYAYKGsGRPDKETKLYQAPFFNVw-SQGKVCTGNA--AMPVGDNAAI-PHMWVDAFFGSNFTHpnf 204 Polaromonas nap...
Q11ZD1       210 ------tvpIVGDDPYAFIADLMETEA---KEFPAAALKPM 241 Polaromonas sp. JS666
WP_005828792 193 ---------LGGGKNPTRNNLVLVTERmreQPFDNDELQPI 224 Bacteroidales
WP_011965215 193 ---------LGGSRNPTGSNLVSVTEKaraNPFDENELKPM 224 Bacteroidales
Q8A4F1       193 ---------LGGNRNPTRSNLVSVTEHarnNPFDYSELQQS 224 Bacteroides thetaiotaomicron
WP_015186491 188 -------qgKSKSYRENVRSHLQQLHNsnaKKYPTRDLVPW 221 Cylindrospermum stagnale
WP_014003273 191 gi---rtsyPGGI--YSLWNDLLDGMH---TTFPEQVLVsp 223 Acidithiobacillus caldus
Q5NXB4       189 hekdalvkyKGGS--AKFWNAMLSGKF---KSFPQEVLVPA 224 Aromatoleum aromaticum EbN1
WP_013292939 195 hekgaltkyRGGI--FALWRALMKG-----RAFPTKSLVSS 228 Gallionella capsiferriformans
Q21Q52       191 psr-rlttyRQGE--KALWKHLMTSKKk--PAFPTDKLKPF 226 Rhodoferax ferrireducens T118
WP_011797951 205 kek---drlvkGVCPIDFWKAMTEKPL---PVFPEGRLVDL 239 Polaromonas naphthalenivorans
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