Conserved Protein Domain Family
SM-ATX

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pfam14438: SM-ATX (This model is not part of the current CDD release)
Ataxin 2 SM domain
This SM domain is found in Ataxin-2.
Statistics
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PSSM-Id: 521207
Aligned: 98 rows
Threshold Bit Score: 54.1072
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002848499  112 HDRLIFLLTAAIGSNVFLT-MKDGEKFTGIFSGSTLe---sNETIIILKMARHPPSdseaastqsngvsqtkSPYLGSGP 187 
XP_002908029   99 RHRALFAFRFLVGKAVELQlVASDDRYVGILDCVDP-----DDFSVVLKSTKRLSS----------------GQNATPFE 157 
7_pfamImport    1 RHRALFAFRFLVGKAVELRlVAPDERYAGILDCVDP-----DDFSVVLKNARRLASp--------------dSAVTQPFA 61  
EFJ22693       13 SSKGSANFDSYIGSLISLT-SKSDIRYEGVLYTIDAe-----NCNIALQNVRSYGTegrkk-------egpqIPPRDSVY 79  
XP_006385151    6 SSSSSKAGESYIGSLISIT-SKYEIRYEGVLYHINPq-----DATIGLKNVRSYGTegrkk-------dgpqIAPSDKVY 72  
KAG5079637      6 ASRSSSAADSYIGSLISLT-SKSEIRYEGILYNINTe-----ESSIGLRNVRSFGTegrkk-------dgpqIPPGDKVY 72  
EFO86643       11 NGDVLCAINDMIGRVILVS-TTDKKRYSGVLDAVSK------DLAFGLQCVVELTKene----------nnlLRTESEVV 73  
G5ED29         11 NGDVLSAINDMIGRVIIIN-TTDKKRYSGVLGAVSQ------DFDFGMQCVVEITKene----------nnlLRTESECR 73   Caenorhabditi...
EGT34835       11 NPDVLFAIHDMVGRVIMID-TVDKKRYSGVLGAISE------DFIFGVHCVVEITKenq----------snlLRTESEVI 73  
XP_001382871    1 NNRLLYLVTKSIGKSCVAT-ITNGARYQGLLVSADLsptgsSALSVVLMNPVNVGKslia--------eksnIDSNGDHL 71  
XP_002848499  188 Dh-QLMIYVQDITCLDIP 204 
XP_002908029  158 DgsTVIFRRQQLAHLVAD 175 
7_pfamImport   62 DgsTVIFRRHQLAHVVAD 79  
EFJ22693       80 D--YIIFRGSDIKDLQVK 95  
XP_006385151   73 E--YILFRGSDIKDLQVQ 88  
KAG5079637     73 E--YILFRGTDIKDLQVK 88  
EFO86643       74 E--KMMFNFEDIVDFAYV 89  
G5ED29         74 D--KMVFHYSDIVDFAYV 89   Caenorhabditis elegans
EGT34835       74 D--KMMFQYKDVVDFAFI 89  
XP_001382871   72 D--KLIIQSKDLIDLEVI 87  
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