Conserved Protein Domain Family
RLAN

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pfam14401: RLAN 
RimK-like ATPgrasp N-terminal domain
An uncharacterized alpha+beta fold domain that is mostly fused to a RimK-like ATP-grasp and is found in bacteria and euryarchaea. Members of this family are almost always associated in gene neighborhoods with a GNAT-like acetyltransferase fused to a papain-like petidase. Additionally M20-like peptidases, GCS2, 4Fe-4S Ferredoxins, a distinct metal-sulfur cluster protein and ribosomal proteins are found in the gene neighborhoods. Contextual analysis suggests a role for these in peptide biosynthesis.
Statistics
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PSSM-Id: 494244
Aligned: 54 rows
Threshold Bit Score: 112.322
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014870828  26 FDQYLQFAAPAS-SRVRVINLCQSARYLSRGYYCSLLAEARGHNVVPSVITLNDLS--RKGLFSLQLEQL---------- 92  Marinobacter
WP_015402859  26 AIQYLQREELSQ-DPHLVINLCSDLSYNSEGYYCSLLAQARDHKVIPKVETLNKFD--NSITMK-----L---------- 87  Desulfocapsa su...
EGJ72459      26 VSDYLKNKSLSK-GKKLVINLSNSYVYNSEGYYGSLLAQARGHQVIPGVRTINKLE--AGTGIRM--------------- 87 
Q8A7Q0        26 VSDYLKNKPVEK-DRKLVINLSNDYSYNSEGYYCSLLAQTRGQRVIPDVDIINKLE--TGTGIRM--------------- 87  Bacteroides the...
Q5NIA2        26 THQYLQNISTKP---NYIINLSEQMNYLEQGYYACLLAHSNKDTIIPTVETLNSIShfEQTLLSNLVNNK---------- 92  Francisella tul...
Q5QVG4        27 ASEYLQSAHLQ--SRYHVLNLCNDLSYLSTGYYVSLLAEARGQRVMPSVATINDLT--NFSHYQLLINTA---------- 92  Idiomarina loih...
Q21GK7        25 FNQYLQDYPKLNePKTRILNLCDTEQYLSKGYYCSLLAEARQHKSLPSVSTINELR------------------------ 80  Saccharophagus ...
WP_015819233  24 FDTYLKDYPKLNePRLRVINLCDTSRYLSQGYYCSLLAEARQHDVLPSVKVINNLR--ASGVGGLWFN------------ 89  Teredinibacter ...
Q0W5G3        12 pfAFLQSSVK-----GDVLNVSHDYRYQKMGYYVSMHAEMCGSPVTPRCSDILDSH--RNPLLMIRAARAgipclpytlv 84  uncultured meth...
WP_014704454  26 VDDYLQNPSVISgGRAQIINLCGSLDYLSPGYYCSMVAEARDHRVMPSLRTINDLS--RKSLYAFDLGEL---------- 93  Methylophaga fr...
WP_014870828  93 -----------------------------DASVIQWLDaaiv---ptaeNSHSAKEVRIRT------------YFGESSQ 128 Marinobacter
WP_015402859  88 -----------------------------DSAMSRLLRfdks----alfEKECDCSHHLDL------------FFGKCED 122 Desulfocapsa su...
EGJ72459      88 -----------------------------DQTLQKLCYqwi------qkNNITTDTWYLNI------------YFGSCQE 120
Q8A7Q0        88 -----------------------------DRSLQALCYqwi------qkNGIKSDIWYLNI------------YFGKCRE 120 Bacteroides the...
Q5NIA2        93 -----------------------------DYKSLNTLN---------------VDFLAIKV------------FFGVANI 116 Francisella tul...
Q5QVG4        93 -----------------------------DRSLTKYL------------QNRDEKSLSLLI------------CFGLCEQ 119 Idiomarina loih...
Q21GK7        81 -----------------------------DASTSTSKAlywgrelnqinLELNEPALELLV------------CFGFGEH 119 Saccharophagus ...
WP_015819233  90 -----------------------------DKVLGKDVS-------------ADEITGAHLV------------CMGEVAD 115 Teredinibacter ...
Q0W5G3        85 sryernmclpalcfavnpytcnsvtqvksESKMLRTLK-----------SLSMNNRYPVSVqplvgdvieavqVFGETDV 153 uncultured meth...
WP_014704454  94 -----------------------------SNQLDKVIAa---------cGKQSETQFKLTV------------FFGQCEF 123 Methylophaga fr...
WP_014870828 129 PELKPVARALFDRLPCPILEVVFKRRK-TWQIESMKPAAPVDLQEQEQDVFASS 181 Marinobacter
WP_015402859 123 PKYERLGRFFFDLYPCPLMRVSFSGPQ-RAEICNIRLLSLTELDDRQQDLFAGS 175 Desulfocapsa sulfexigens
EGJ72459     121 KGLEKIARFIFDNYPCPLLQVELNTRSrN-QIESIKYLSLDNLDETQQDFFANA 173
Q8A7Q0       121 KGLERVARFIFENYPCPLLRVALNTHPkN-QIESIQFLPLNRLDDEEQDFFANT 173 Bacteroides thetaiotaomicron
Q5NIA2       117 KGIEKIAKKIFETYPAPILELILEKQSsLWKIKTIAVGRINSLSDIEQTIFANA 170 Francisella tularensis subsp. tularensis
Q5QVG4       120 PELASFARQIFERYPCPILKVELEFNG-RWHINKLTSGALNQLTDEQQSFFGNS 172 Idiomarina loihiensis
Q21GK7       120 AQYKKLARKIFEQYPSPILRVKLW-REeTGVCVKVERVPYANLNEHDKTFFFNQ 172 Saccharophagus degradans 2-40
WP_015819233 116 VRLKKLAQRAFEEFSAPLLRMVLS-REaSGLKAHVTRVSLASLSEAEQRFAQDv 168 Teredinibacter turnerae
Q0W5G3       154 PEAKSIARKFYEEFRIPIGKLILQVVDgG---------------EARLSHFEPA 192 uncultured methanogenic archaeon
WP_014704454 124 KALQKLARQIYEQYPCPILEIAFTHKG-HWLISQIRAGALTQLNEHDQDLFANA 176 Methylophaga frappieri
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