Conserved Protein Domain Family
DUF4420

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pfam14390: DUF4420 (494233 is an unknown moldel)
Putative PD-(D/E)XK family member, (DUF4420)
This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 310 and 334 amino acids in length. Advanced homology-detection methods supported with superfamily-wide domain architecture and horizontal gene transfer analyses have established this family to be a member of the PD-(D/E)XK superfamily.
Statistics
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PSSM-Id: 494233
Aligned: 27 rows
Threshold Bit Score: 238.386
Created: 22-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012781103     6 EIWKSINEESASnpnRVQIARMIP--SKGAFSAFLATDFKKKIRLLYVKLDRDVFLTINDlprfrgFDISCVISSIGRFK 83  Pedobacter he...
WP_014201796     9 EIWSTLPAPDGVs--GGYLTSTITldDADPVIIHLFRDHLDNYHMAIEAPEAQSKHLNDPgv--ngLEIQLVEYRFHSGS 84  Owenweeksia h...
WP_012522975     6 ETWRALRASRPVgedqvatap--lvhagvetSLSLAVSASGDLHLLAPVQGPPTRSLP--------QDYNGLRLRERRLG 75  Phenylobacter...
WP_021759023     8 sIWAGLRAERPAhddalatap--agtmpdgrEILYGIDRRSDLHLLIPVDGGPPGDMP--------QDLQGLRGRHRLVE 77  Megalodesulfo...
Q28ND3           9 REWIEIRATGQGdgilevpsr-atavttgygHVRIAIGPQGEPRLLVPVGSPASGSTN--------VGSRNLVLARSSFR 79  Jannaschia sp...
WP_015265795     6 dEFENLPIPNTTkehsysa-----vavkgfeNHRIAKDFNENPCILISVTQKKQNFKVARqkl-ynLSITHNLSCEIHVE 79  Echinicola vi...
WP_013046168     6 NPWSHLSIPDKP---NSYSSRRVA--TPTSHSFYWAKNDLGQCCLIFSCASDTK------------VKIDEVKLKGILLE 68  Candidatus Pu...
jgi:Bcell_1131   7 NPWTEL---------NYLNKIRVK--ESIKYNAFWIRDALNKYGLLIQCDENFILPKRE-------IKLKGIEVKLDNTS 68 
Q8ETT0           6 NPWEGM---------GYSSQRRVE--SSMRHNIYWITDLHGNYGLYFLVGKVPFGSDNS-------IKLKGITIIKRPKG 67  Oceanobacillu...
jgi:Mmol_1846    6 LPWEGM---------PESSRRRIStiTNH--NVYWITDLEGRCGIFIKSRSEFANVKTS-------ISLNGIDLIKRNST 67 
WP_012781103    84 NTEFLK------LTQAIPETDSIFELVISDLCDHIIRIEEk--qSLKPILVNVLTEWKFFFDRSEDKILTLSEQKGLFGE 155 Pedobacter he...
WP_014201796    85 TRRFID------LACSISDYLEEFTEVVREIVTEILQRGT----APVIAVQMVIRNWLTFWGKVNKDILSESNQIGLICE 154 Owenweeksia h...
WP_012522975    76 DQVCL-------DLCSPAAHERMFATLCSELADAILTDGRd----pWAAAIVIVQRWQTAWRPVRQ-PMSRSAQIGAIGE 143 Phenylobacter...
WP_021759023    78 GQRHCL------DLVAAAAHERLFSPLVGEVLTAVLDQNRs----rWKAVNSIIRAWQSAWKPTIP-EMSKAVQVGLFGE 146 Megalodesulfo...
Q28ND3          80 SSGKLEhf--idVTLRNSQLTRVFTELVEEILKRLENGEPp-----eSSVHGTIQDFRNLLAKTPEGEIPLTKLGGLIGE 152 Jannaschia sp...
WP_015265795    80 NKKEEHnfsvirYSGNDRDLKRYFLKACEILVPSLGNSPDn------kQITHTVNKFIELFKVLKE--PPKKTLQGLWSE 151 Echinicola vi...
WP_013046168    69 QHISNEkqfnliIKLIDDPSRDIFRTICNDLVASTRTIDAkkpsTVVLAINARLKRWQELLGKKKSDLLSNSEQLGLFGE 148 Candidatus Pu...
jgi:Bcell_1131  69 TPNQLI------LLLKESKDWEIFLVLCNDLINVMKQNEK----EIIVKVMKRLVRWQKLLQRTTLNLLSKEEQMGLFSE 138
Q8ETT0          68 KLIELF------LILNNKEDWQVFHVLCNDLITVAKEFDSe--eRLISSIEIRLIRWQQLLKQDRSKMLTLEEQMGLFSE 139 Oceanobacillu...
jgi:Mmol_1846   68 GTGELI------LLLNDIKDAPIFNKICEDLISSIEQHENn--dAMIIGVEVRLQRWQELLRKGHSNVMSVELQMGLFSE 139
WP_012781103   156 LTFLKNYLLKIYTPeqALV-FWTGGNRTNHDFQLDKKAVEIKTTsGKMPWKFMVSSEKQLDNTGLEFLYLVLFILNv--H 232 Pedobacter he...
WP_014201796   155 LLVLEKLCEIDPQK--ALE-SWKGPLQEKHDFSFPNWSLEVKGT-RNSKRIHTINGIEQLVAPINKQLSFVSFQLVt--A 228 Owenweeksia h...
WP_012522975   144 LLMLQTLWLPALGPd-AVH-YWSGPDRERHDFVTPRLHMEVKAT-TRSRHEHEISRVDQLRTPEDRRLMLASVQL----E 216 Phenylobacter...
WP_021759023   147 LLTLKEIMIPALGPe-SIH-SWSGPDSERHDFVGPAVHLEVKTT-RKDRHVHEISRVDQLDVPEGRRLILVSILL----E 219 Megalodesulfo...
Q28ND3         153 LVILERLTAMRPE---ALD-GWTGPIGQRHDFRRCSIALEVKSSlRSDAARVTIHGPEQLLPPSDGRLILVHIRL----E 224 Jannaschia sp...
WP_015265795   152 LFLIHQSNNPR-----ELVrAWHTIPEEKYDFSIANLRIEVKS--SSTRSRTHHFSIEQLLPPLKSKLYVASLFV----E 220 Echinicola vi...
WP_013046168   149 LSILNEYFLENFKPitAIA-TWRGPSGSEQDFGFGEHLVEVKSQfSTSDSKIQINSLEQLDDISGY-IWLVHQTFAaneH 226 Candidatus Pu...
jgi:Bcell_1131 139 LKILKDYLIPRYGYsrSIN-SWVGALGDKQDFLLENLAIEIKSYrITSGNSVWISSKEQLNSEKNP-LYLVACAI----N 212
Q8ETT0         140 LLCLKDVVGPIVGInqAIR-SWVGPDFDKQDFLFDNSVVEVKSYkTSKGEIINISSKEQLYTLKNS-LYLITYAI----S 213 Oceanobacillu...
jgi:Mmol_1846  140 LVFLKDYLSRELNIesAII-SWVGPEFDKQDFLFDSAIVEVKSYrTSKGQLVDISSKQQLYSEKQP-LFLVTFGL----T 213
WP_012781103   233 DNRVSD-NLSTLI-----DEIFNMI--RQDSSALLQFEIKLAKYGYNILYAGKY-TTGFSITQAKFFEVR-NDFPRLINT 302 Pedobacter he...
WP_014201796   229 ISEVGV-NLADLV-----KLIRDVQf-KSRPDLVIKFNKLLLSANYSPLHEEYYrQSGYDILSAFVYSVE-GDFPRLIPK 300 Owenweeksia h...
WP_012522975   217 ESAMGVvSVASLA-----DQLVEAL--RADPAALDGFLLRLSGLDWSEEMRRSPdLVRCHLRDAQIFEVD-DDFPRLPAD 288 Phenylobacter...
WP_021759023   220 ESAAGTeSVASKM-----DEIIDLV--RGDPAASDEFMARMIRLGWNEELRRSGqLLHFHLRGSHIYEVN-DLFPRLPAG 291 Megalodesulfo...
Q28ND3         225 PVDGGAlSVAELHqaiikHGTDELA-----------LDERLAEIGCRDPRAEEWnATRFAIEGIDFYAVS-TGFPSVTPA 292 Jannaschia sp...
WP_015265795   221 ILAGGK-SVEHLL-----NEIVERL--DNEFDLIEKLNFLTYSTLGGAFDKIENvYYDYQLAKDSLRLYNsMDIPKIE-- 290 Echinicola vi...
WP_013046168   227 KSGISR-TLNAIV-----SEISSKI--DSDIFAMDSFKTILLEIGFEADPA--YdEVAYELAQRTFFKVS-DAFPRIKRS 295 Candidatus Pu...
jgi:Bcell_1131 213 EIYKGE-TIVDLV-----NSITGAI---DDNNLLEEFMEKVELYGYIPEIQK-DsLSKFSMEQINVFEVR-EEFPKIHYD 281
Q8ETT0         214 LSQNGS-SVKDVV-----NHIRGLIknEEDNDIINIFEYKLIDYGYIPEIIK-EpLRKFKVDKQRYYLVS-DNFPRIVPK 285 Oceanobacillu...
jgi:Mmol_1846  214 RSEAGQ-TVEDIV-----SEILELLa-PVSKLTLDVFNTKLINYGYIPELKN-EpYVGFIIDKTRFFSIG-EGFPRIPF- 283
WP_012781103   303 -----NIP-AGIGDIKYTIMAS 318 Pedobacter heparinus
WP_014201796   301 ml-stSLS-SRISDVRYDIDLT 320 Owenweeksia hongkongensis
WP_012522975   289 -----FVLpDGVLAIRYTISLA 305 Phenylobacterium zucineum
WP_021759023   292 -----FVPpEGVVAIRYTIDLT 308 Megalodesulfovibrio gigas
Q28ND3         293 sfsddMLP-AGVVNLTYEIDLS 313 Jannaschia sp. CCS1
WP_015265795   291 -----FAP-DDVFDVRFKSSID 306 Echinicola vietnamensis
WP_013046168   296 -----STP-SEIISARYVVDIg 311 Candidatus Puniceispirillum marinum
jgi:Bcell_1131 282 -----HVS-PLITNLKYRIDLS 297
Q8ETT0         286 -----DIR-NEITSVKYSIDLS 301 Oceanobacillus iheyensis
jgi:Mmol_1846  284 -----DIP-LEIVKLGYTIDLS 299
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