Conserved Protein Domain Family
CSTF2_hinge

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pfam14327: CSTF2_hinge (This model is not part of the current CDD release)
Hinge domain of cleavage stimulation factor subunit 2
The hinge domain of cleavage stimulation factor subunit 2 proteins, CSTF2, is necessary for binding to the subunit CstF-77 within the polyadenylation complex and subsequent nuclear localisation. This suggests that nuclear import of a pre-formed CSTF complex is an essential step in polyadenylation. Accurate and efficient polyadenylation is essential for transcriptional termination, nuclear export, translation, and stability of eukaryotic mRNAs. CSTF2 is an important regulatory subunit of the polyadenylation complex.
Statistics
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PSSM-Id: 521164
Aligned: 90 rows
Threshold Bit Score: 53.3113
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_004179750 181 HLP---AFQPnIITSPDQISQNLSKIPPLQVIEIISNLKILASQQGsntrSQLEEFLKTNRELIVTLSQALLEMGFIDYS 257
XP_002839007 100 DLPrgmELPK-GLSATEAISRTMDAIPSAKLGEVLCEMRDLAIKDP----VRVTELLRQAPQLSYALFEAMAKMGQVDHA 174
EPB90610     145 QLPpqqQVPPvNMSSVDEISKVLASMNSQDLFTLMSQMKQMSFERA----DFTREFLTSNPQVAYALFQAMVMMNIVDPN 220
Q6C6I9       107 gLPagvPLRQ-GLEPAQQVSETMNGYTKSQMVAVVTDLMSMSKNSP----QLLADLFAQAPQLAYAAVQCLLNLGLVDEQ 181 Yarrowia lipoly...
XP_011277339  76 PLPpgiQLPQ-GLSYADSISKTLQSLDDTRKLTLIEDAKEMAKRNP----SLMNELLTQCPQLSYALVETLLITGTSTPE 150
XP_036663823 100 PLPlgiQIHP-NQNASQVISSILSNIDSNSALQILNEMKTMSQENP----KGTKLLLERFPQLALAMVELGLLTNTTNHE 174
XP_001383390  96 PLPlgvQIHP-NENSQQVISNILSSIDSNSALRILKEAKTMSTENP----KLTKLLLERFPQLAHALVELSLISNITNGD 170
XP_006685514  97 PLPlgvQIFP-NQTTGQVISSILSTLDEQTASQILKEAKDMSSTNP----IMMERLLEKCPQLAHALAETAILLNVTTPE 171
XP_001487660 101 PLPlgmQIYG-NQNPAQVIANALSSLDQTAAYQIIKDARQMSIDNP----PLMKRLLEQAPQLSHALVEICLLLNLTNRD 175
EEQ35936     102 PLPlgvQLYH-NQNAQQAISSILSSLDSQTASELLKEARAMSLENP----ILMKKLLDQCPQLAHALVETSLMVNVTTKD 176 Clavispora lusi...
XP_004179750 258 IVTQVL 263
XP_002839007 175 QMGRyl 180
EPB90610     221 IITRMM 226
Q6C6I9       182 RVLSVV 187 Yarrowia lipolytica
XP_011277339 151 DITKCL 156
XP_036663823 175 LIELTL 180
XP_001383390 171 LIEMTL 176
XP_006685514 172 TVEICI 177
XP_001487660 176 LVELCL 181
EEQ35936     177 LVELCL 182 Clavispora lusitaniae ATCC 42720
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