Conserved Protein Domain Family
R2K_3

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pfam14243: R2K_3 (This model is not part of the current CDD release)
Domain of unknown function (DUF4343)
This domain family is found in bacteria, eukaryotes and viruses, and is typically between 127 and 142 amino acids in length.
Statistics
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PSSM-Id: 494097
Aligned: 36 rows
Threshold Bit Score: 80.9255
Created: 21-Aug-2024
Updated: 4-Feb-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_083481091  33 ATGAavh-rtRVIPFTERFD--GPPPalsgpvlcyg--ygalvaagrHLGWRPCgwdgaglgLRAVVSSLgplawnaaAT 107 Jannaschia dong...
WP_045971828  24 ELGIe----yEVVNIKPTDTeiAMKAnrkdvfvygs--vtmarlakqYKDWFPGsf-----yGGNHLYEVyahy-ygsHL 91  Flavobacterium
WP_057946907  28 DAGArvq-dvLVVPFSDELG--NEVPpldgvvipyg--atkltrlaqKRGWRGLcfdeaafrVDAWNRHRddm---lnQH 99  Lysobacter enzy...
WP_006974074  24 AQGHa----vAPIVRPPFSD--AAPEldtdeatvfygssslidsvvrDGRWRPGawal-dddYASWIERYgah--mlnVD 94  Plesiocystis pa...
WP_012606891  22 VYGDayavrlEDIPSLPKSGwmpigtve------------fcrtatvHQGIQEPd-------PLDYPEALtkw---mpYG 79  Acidithiobacillus
WP_014003161  19 MYGE-------EVQSATLEGiaDLPRsgwmpvgsv----afcraamaHQGLVEPe-------PLDYPECI--------AH 72  Acidithiobacill...
WP_068720117  27 KMDIp----iIRYKAIYSVT--DNDPtdlvvgtf-----sdvsvaldKLGVQLT--------PVDYPDELmpf---vgRK 84  Veillonellaceae...
1_pfamImport   1 ALHIp----vVKYKAVYSIT--DNDPmdpvigtf-----sdvkvaleKLGIKPA--------PLDYPEQLksf---igRK 58 
WP_012938477  27 ELGAe----iRFFHNPLEMR--QAEPedilvgyv-----eavqqhleEMGFSYP--------DLDYPAELeyc---lgRK 84  Acidaminococcus...
WP_013370415  27 QMGFe----iRYFENINKLT--DHNKedivvsyv-----ddvrtalhIYDIVAS--------EIDYPKELtay---lgRK 84  Paenibacillus
WP_083481091 108 FHPLSDLRRLaegl-----ttqvFVRPEAETk-VFAGRL------H--DGTSML---RWLDGLDradw--agaDDPLFAV 168 Jannaschia dong...
WP_045971828  92 LNDEIKIGKLtddlvw-qkgekkFIKPYKEAk-IFTGKVf-----EkeEWEDFIieaLAHPKLSit------kDSEIQIS 158 Flavobacterium
WP_057946907 100 VRQM-SVRECmaamqdedeesrwFVRPVQDLk-HFDGTVtvareiR--RWMSSVd--SGNYSFDg--------DTEVIVA 165 Lysobacter enzy...
WP_006974074  95 ARFL-SLEELaadaelansealrFCRPSADSk-LIAGQV------D--SGAALV---AWARRVLaledasmdpDTKLMLA 161 Plesiocystis pa...
WP_012606891  80 GHVLRRYGEM----------------PRGWTleQ-HQGI---------HGKPVVtklDESLWKP---------DTPFWTS 124 Acidithiobacillus
WP_014003161  73 FAAAGHFLET-------------YADVPEGWt-PDDHRV---------HAKPYRtklDPSLWTP---------ETPFWIA 120 Acidithiobacill...
WP_068720117  85 IWQS-TLFTItshpe----ywhvFVKPVVDVk-RFRGTVl-----D--KSEDLI---KLGGGLE---------DIHVWCS 139 Veillonellaceae...
1_pfamImport  59 IWKS-TLFTItshpe----cwhvFVKPIEDVk-RFHGTVl-----D--KSEDLI---KLGGGLE---------DIDVWCS 113
WP_012938477  85 IWKS-TINTInshpe----qwpvFVKSIADK--EITGVLv-----R--SPKDLI---GCGNWEY---------DVPVWCS 138 Acidaminococcus...
WP_013370415  85 IWKS-KLSVIannpe----nwniFIKPVEDK--KFTGVVv-----R--SMKDLI---GCSTYGE---------DPEILCA 138 Paenibacillus
WP_083481091 169 APVrPCRTEWRVWIVDGVPIAGCRYgvd----ghaDPAPDL----PGRIAAFARRAVALH---DPLPAYVLDVGEDA-A- 235 Jannaschia dong...
WP_045971828 159 KPK-TTIKEARVWIVGGQIIDAGYYk--------fNGDFAFeasvAAEGMAFAKEMISLF---NLEEAFVMDICLTS-D- 224 Flavobacterium
WP_057946907 166 PVQ-KLHGEWRFFVVDGQVVDGSSYriagqrlanaVARPEL----------YETAQSLADgwlP-HRTCVMDVALTD-E- 231 Lysobacter enzy...
WP_006974074 162 EPV-GLSDEWRTFVVDGRVVAGSHYrsyqr-levsPDLPGE-------VVAFTEALLARG---SPAPVVVVDIARSG-S- 227 Plesiocystis pa...
WP_012606891 125 PYH-RFGPEYRFYVLHGEILGYGRYdd-------rEDDPNDp--lLLDMRAVREMIDAYQk-aGAPVGYGLDVGVSDeD- 192 Acidithiobacillus
WP_014003161 121 NWH-RFGPEYRFYIRQGEIVGCGRYdd-------rDDDPNDp--lELDMGRVLAMVNQYQk-dGAPAGYGLDVGVSD-Ed 188 Acidithiobacill...
WP_068720117 140 EKV-KFLSEWRIWVLQGNIVGLSPY----------RGQWDL----FPDPGILKNAVEAYH---SAPQAYALDFGVTD-E- 199 Veillonellaceae...
1_pfamImport 114 VKV-QFLSEWRLWVLNGTITGLTPY----------KGRWDV----FPDPSVMEEAVHRYE---GAPSAYALDFGVTD-D- 173
WP_012938477 139 EPV-RFVTEWRCFIRYGRILDARHYr----------GTWEK----IPDPAVIKRAVRDYK---TAPAGYSLDFGVMD-T- 198 Acidaminococcus...
WP_013370415 139 DIV-NFVAEWRCFVRYGKILDIRRYk----------GNWRA----HFDYKVVENVVSQFQ---AAPKGYAVDFGLTD-K- 198 Paenibacillus
WP_083481091 236 G-LGVIELNAVNSAGFY--------A------ADI-GAIVAAL 262 Jannaschia donghaensis
WP_045971828 225 G-WKIVEINCINSSGFY--------T------NTDvKSIIKAL 252 Flavobacterium
WP_057946907 232 G-YKVIEFNTFNSSGFY--------A------HDI-EKIVAAV 258 Lysobacter enzymogenes
WP_006974074 228 G-LYVVEFNGFNSSGFY--------A------AEL-SAIVAAV 254 Plesiocystis pacifica
WP_012606891 193 GmTKLVEVNDGWALGFYkgscshrdY------LRLlETRWLEI 229 Acidithiobacillus
WP_014003161 189 GlTYLVKVIDGWALGWYrgtchprdY------LSLlEVRWQEI 225 Acidithiobacillus caldus
WP_068720117 200 GkTLLVEVSDAYALSSF--------GldpvlyTKIlMTRWQEL 234 Veillonellaceae bacterium DNF00626
1_pfamImport 174 GrTLLVEVSDGYALASF--------GlrpdiyMNIlKTRWQEL 208
WP_012938477 199 DkTLLIEVNDGYALGSYglf--yidY------AKIlAARWAEL 233 Acidaminococcus fermentans
WP_013370415 199 GeTLLVEVNDGYSLGHYglf--sldY------AKLlSARWAEL 233 Paenibacillus
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