Conserved Protein Domain Family
COP23

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pfam14218: COP23 
Circadian oscillating protein COP23
This family includes the circadian oscillating protein COP23 from Cyanothece sp. (strain PCC 8801). The levels of this peripheral membrane protein display a circadian oscillation.
Statistics
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PSSM-Id: 494075
Aligned: 71 rows
Threshold Bit Score: 99.2782
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EKQ70020      75 FSCQInnGQYTVMYQPeSQPRQMYPWAIPSamGGGWDPARRCYEISRRLESYrpDGLLEMQTAVENGYNIVCVtTQRVPG 154
WP_015117448  86 FSCQMdtNGYTVMYSPqSQPNQLFAWATPQalGGGWDSQRRCNTIAQRLESYrpDGLLELRTSTLNGYNVLCVtSEADPS 165 Rivularia sp. P...
WP_015197123  75 FACQQqnGEYTVMYQPqSRPGQFYAWATPRtmGGGWDTARRCQTIAQRLELYrrDGLLELQTGVQNNQNVICAtTEANSG 154 Calothrix sp. P...
WP_015210098  60 FSCQNnnGQYTVMYQPqSQPGQFYPWAAPTtlGGGWDAQKRCQAIASRLELYrpDGLQELQTAFENNENIICVtTEANTG 139 Cylindrospermum...
WP_015113439  72 FSCQNtnGQYVVMYQPeSQPGRFFPWAAPAqlGGGWDPYKRCVTIAQRLEEYrpDGLQELQTGFLNNENIVCVtTEANSS 151 Nostoc sp. PCC ...
WP_015128502  69 FSCQTynGQYTIMYQPqSQPGQYFAWATPAalGGGWNSQLRCQTIANRLETYrpDGLQELQTAVENNENTICVtTEANPT 148 Calothrix sp. P...
WP_012412789  68 FTCQTynGQSTVMYQPqSQPGQFFPWAAPAalGGGWDAQRRCATIASRLELYrpDGLQELQTSVENNENIVCVtTEANPT 147 Nostoc punctiforme
Q8YUM7        84 FRCVPinGQQTVVYQPqSQPGQYFPWAAPRnlGGGWDAASRCQAIANRLESYrpDGLQELQVSVENNENIICVtTDANQR 163 Nostoc sp. PCC ...
WP_013190963  57 FSCQYynGQYTVMYQPqSQPGQFFAWAAPQnmGGGWDAQKRCDAIANRLELYrpDGLQELQIGVENNENIICVtTEANSG 136 Trichormus azollae
WP_015078476  62 FSCQYknGQPTVMYQPqSQPGQYFAWAAPQtlGGNWDAQRRCETIASRLELYrpDGLQELQIAVENNENIICVtTESQPN 141 Nostocales
EKQ70020     155 CRIVMTVPRGQDPIATRDRVFQNLTiaDsGQpTQGVNTFVSgrqsgmlgeaarwlgiglpgggrssigqsysNTIDLRPF 234
WP_015117448 166 CRLVLTVPPGRDAFQVRNDVFQNLVsaDsGQsTIGVNTYRGagledtinlgrt--------llggkraavsrDAIQLKPF 237 Rivularia sp. P...
WP_015197123 155 CRIVLTIPPEKDPYTVRNSVFQNLTtaDsGEqTFGVSTYTNrradgseieqiynag-qsifggkkrpvssskSPISLKPF 233 Calothrix sp. P...
WP_015210098 140 CRIVLTVPRNKDPIAVRNSVFQNLTtaDsGQqTTAVSTYRNsrqggtselynlgr---tifggskkpvtatkNGINLKPY 216 Cylindrospermum...
WP_015113439 152 CRIVLTVPRDKDPYTVRNSIFQNLVsaDdGQqTTAVNTYRNnrggvdeiynigrt----ilggnnrqvsssrSGINLKPF 227 Nostoc sp. PCC ...
WP_015128502 149 CRIVLTVPRGKDPFVVRNSVFQNLTtaDsGQqTLAVNTYANrgrgnddlfnlsrtl-lgsgnslgtssttsrRGLNLQPF 227 Calothrix sp. P...
WP_012412789 148 CRIVLTVPRGKDPVVIRNSIFQNLTtaDnGQqTIAVNTYGDrssggnelynlgrt----llgsgnnrisssrSGINLKPF 223 Nostoc punctiforme
Q8YUM7       164 CRIVLTVPRNQDPYTVRNNVFQNLVtaDnGQqTTAVNTYRGnndlynlgstll--------gngnnrvsssrRGINLKPY 235 Nostoc sp. PCC ...
WP_013190963 137 CRIVLTVPRGKDPYAVRSSVFNNLAnaDnGQqTISVNTYTNgnpagsneldnlgr----sllgrnnrasssrSGINLKPF 212 Trichormus azollae
WP_015078476 142 CRIVLTVPRGKDPYTIRNSVFQNLTtaDsGQqTNAVNTYTNrnrgngdslyslgq----tllggknqvssakQGINLKPY 217 Nostocales
EKQ70020     235 LD 236
WP_015117448 238 LD 239 Rivularia sp. PCC 7116
WP_015197123 234 LD 235 Calothrix sp. PCC 6303
WP_015210098 217 LD 218 Cylindrospermum stagnale
WP_015113439 228 LD 229 Nostoc sp. PCC 7107
WP_015128502 228 LD 229 Calothrix sp. PCC 7507
WP_012412789 224 LD 225 Nostoc punctiforme
Q8YUM7       236 LD 237 Nostoc sp. PCC 7120
WP_013190963 213 LD 214 Trichormus azollae
WP_015078476 218 LD 219 Nostocales
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