Conserved Protein Domain Family
HTH_39

?
pfam14090: HTH_39 
Winged helix-turn-helix domain
This winged helix-turn-helix domain is often found in phage proteins and in bacteria and is likely to be involved in DNA-binding.
Statistics
?
PSSM-Id: 493961
Aligned: 10 rows
Threshold Bit Score: 63.9389
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_012697007   28 GQCAQVLNILRQHPEgVLSLELTASAAIPE--AAARIHNLRHKGFNVITRIEPEIRFRGATRrNVARYSLGVP 98  Laribacter hongkongensis
Q3SHD0         25 SQSMRLLAAFEARRS-VTTIEARGDLDILM--SAARVFELSARGFEIVTIWTNAPTECGRRH-RVARYVLMKV 93  Thiobacillus denitrif...
jgi:Pnap_2648  25 VQCVRIRAAL-SQFS-LTTFEAMRQLDVYD--PRARVLQLRNAGESITTTWTRIATESGDLH-RVGVYVLATG 92 
WP_012406099   65 TQCARLLTALFRLGS-VTTFEASRYLDIYH--PPARKRDLVQQGYLIKTRSRAERTECGSIH-RIGEYCFVNP 133 Paraburkholderia phym...
Q88AU4          8 EQDRKMIEAL-REGP-ISTIEAAQNLDIVQ--PPNTIRRLRNRGFDIRTNWVWQATEPGRPPhRVAKYVLMRE 76  Pseudomonas syringae ...
WP_012172123   12 PLARRIFAHLERTGS-ISAREAMADYGITSatLSRRICEMEGAGIEISRER----RIHPMTGrRYTRYALASR 79  Azorhizobium caulinodans
jgi:Asuc_1218  25 TQCKMILTALRNGER-LTQLLAYERFGCTR--LGARIYDLKQQGHDIQRRMVTVARGK-----RVAEYFMNEV 89 
WP_012031102   13 TQKRLIAAHLKKHGS-ISSWEAIELYHCTR--LGAYIYELRESGWDISTLRKTFTSSVTGNSgVYALYLLNES 82  Dichelobacter nodosus
Q2RVM1         15 SQEDLILDHLESGRA-LNAAQAWTLYDCQR--LAARIHTLRARGYRIDTRR-----QGGSALyQLDDY-LADA 78  Rhodospirillum rubrum...
Q5F7Q8          6 TQCKQIVDYIRNKGC-ITSLEAYQNLKVTQ--LAARITDLEGRGFVFAKPK----YKVGNCKnPVAHYSIAKs 71  Neisseria gonorrhoeae...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap