Conserved Protein Domain Family
HTH_39

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pfam14090: HTH_39 (This model is not part of the current CDD release)
Helix-turn-helix domain
This helix-turn-helix domain is often found in phage proteins and is likely to be DNA-binding.
Statistics
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PSSM-Id: 493961
Aligned: 10 rows
Threshold Bit Score: 63.9389
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012697007  28 GQCAQVLNILRQHPEgVLSLELTASAAIPE--AAARIHNLRHKGFNVITRIEPEIRFRGATRrNVARYSLGVP 98  Laribacter hongkongensis
Q3SHD0        25 SQSMRLLAAFEARRS-VTTIEARGDLDILM--SAARVFELSARGFEIVTIWTNAPTECGRRH-RVARYVLMKV 93  Thiobacillus denitrifi...
WP_011802027  25 VQCVRIRAAL-SQFS-LTTFEAMRQLDVYD--PRARVLQLRNAGESITTTWTRIATESGDLH-RVGVYVLATG 92  Polaromonas naphthalen...
WP_012406099  65 TQCARLLTALFRLGS-VTTFEASRYLDIYH--PPARKRDLVQQGYLIKTRSRAERTECGSIH-RIGEYCFVNP 133 Paraburkholderia phymatum
Q88AU4         8 EQDRKMIEAL-REGP-ISTIEAAQNLDIVQ--PPNTIRRLRNRGFDIRTNWVWQATEPGRPPhRVAKYVLMRE 76  Pseudomonas syringae p...
WP_012172123  12 PLARRIFAHLERTGS-ISAREAMADYGITSatLSRRICEMEGAGIEISRER----RIHPMTGrRYTRYALASR 79  Azorhizobium caulinodans
WP_012072957  25 TQCKMILTALRNGER-LTQLLAYERFGCTR--LGARIYDLKQQGHDIQRRMVTVARGK-----RVAEYFMNEV 89  Actinobacillus succino...
WP_012031102  13 TQKRLIAAHLKKHGS-ISSWEAIELYHCTR--LGAYIYELRESGWDISTLRKTFTSSVTGNSgVYALYLLNES 82  Dichelobacter nodosus
Q2RVM1        15 SQEDLILDHLESGRA-LNAAQAWTLYDCQR--LAARIHTLRARGYRIDTRR-----QGGSALyQLDDY-LADA 78  Rhodospirillum rubrum ...
Q5F7Q8         6 TQCKQIVDYIRNKGC-ITSLEAYQNLKVTQ--LAARITDLEGRGFVFAKPK----YKVGNCKnPVAHYSIAKs 71  Neisseria gonorrhoeae ...
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