7ADZ,7B5I


Conserved Protein Domain Family
Pvc16_N
?
pfam14065: Pvc16_N (This model is not part of the current CDD release)
Pvc16 N-terminal domain
This protein forms part of a contractile injection system. Photorhabdus virulence cassette (PVC) represents one group of extracellular CISs that are present in both bacteria and archaea. This entry include Pvc16. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 190 and 320 amino acids in length. This domain alone in Pvc16 is able to produce PVC particles with normal length but without the outer sheath, indicating the main function of this N-terminal domain in terminating the tube growth.
Links
?
Statistics
?
PSSM-Id: 521070
Aligned: 104 rows
Threshold Bit Score: 83.533
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
7ADZ_0A        4 EVLKILTDEVNQNFKGl-----E-MEdSEVVLNNVALIDSQQdVAtel----qnKVILSMINLREEVT-M-KNFPNNVLE 71  Algoriphagus ma...
Q39WK4        10 QVCRAIADFVSVGLDAs-------ANsIQVMIGSPASAAPATaDTn-------hRVNLFFYRVEPAGFfTgDT------- 68  Geobacter metal...
WP_011966853   4 vlINTLAEKMNEFLSSyyeraeIiVEaGSIDATPNEDqs--------------dKIILSIVNIERETAmG-ISAPYRNTK 68  Parabacteroides...
WP_014201681   4 saiqfivNFLNKEIQFahdvgsEiVVaGGVMn-----------TDgsvsvgfdnKMVLTLVNLEQEKV-M-KNTGDLNAV 70  Owenweeksia hon...
Q12JT9         4 sctsHIAFRLNQYLKNkfelseDiVVvSNLVn-----------HDgsacahvnnRVVLFIANIEKETA-----MNTNSQL 67  Shewanella deni...
WP_013319383   4 asINYLTRQLNQYLKNtlnlhdDvVViANPAd-----------DDgkmfplaknKLVVFLSNIEREML---PHRSNAAPP 69  Dickeya dadantii
WP_011734323   4 taILHISGQLNQYLRRyfdlseEaVAvSNILe-----------QDgslapritnRLVLFLVNIEKETL---ASRGQQTSL 69  Pelobacter prop...
WP_012489242   4 aaIHHLASQLNAYLKRtnnlteDiVVvSSLTe-----------PDgsvaahvnnKLVMFLTNIEKDTV---PQAKISRAE 69  Cellvibrio japo...
WP_015818773   4 kalnlIATRLNAYILNrvdldeDiVQlASPVs-----------PDgvspieandKILIFLANIAKDTL---AHSTRFKTI 69  Teredinibacter ...
WP_012179119   4 atlKFLTAMLNEELRTrfaaasDlVAlESVAr-----------DPgaggeetanRLVLTLVNIEREGTaG-NTGRVYREE 71  Dinoroseobacter...

7ADZ_0A       72 GT--KVtyKNPKLNINLFLIFCAN--RTGyk----kSLSDLSRILEFFQHKSVFTQSNTSfdrdLeemenvKNFRFTMEL 143 Algoriphagus ma...
Q39WK4        69 --------PGDPWWVRLHCLVTGFglDEEqisagenDLRLLGEVMRLFHETPVQSALTVD----D------ETFRLQVVF 130 Geobacter metal...
WP_011966853  69 NN--TFqqTSPPWYLNIYIMVAAVfsSKRyl----eSIQILLDSISFLQQNSILKLPDQG--------------TITLET 128 Parabacteroides...
WP_014201681  71 GK--GFgkSSPPIYLNMYLLVSANfdSANym----eALKMLSTVISVFQVNSFFSNRTHP----Dlda---klgKLTFEI 137 Owenweeksia hon...
Q12JT9        68 RS--GHfsTAKPVFLNLYLMVSANftGTNyl----eSLKFISSIIGFFQMQPVFNHQNSP----Elda---nieKIILDI 134 Shewanella deni...
WP_013319383  70 GN--RFamTTPPLFVRVSMVVAANftGSQya----eGLQVIAHAMAFLHKNAQLNRYNAP----Dmde---aieQILLEM 136 Dickeya dadantii
WP_011734323  70 TH--ETviSPPPLFLNFFLMVAAHfgNSNyp----eALKFLSSAIGFFQRNPVFDHQNSP----Elds---ridRLILDM 136 Pelobacter prop...
WP_012489242  70 GFdgRSlvPSKTLYLNLYVMLAANfsGANyp----eALKFISRATGFFQLQPVFDRRNAP----Dmds---rieKLVLNI 138 Cellvibrio japo...
WP_015818773  70 EA--GGlrVEEPLHLNFYLFVAANfhASRyg----eALTFLSYAIQHLHENPVVDRRTVA----Dlpp---gldRLIVDI 136 Teredinibacter ...
WP_012179119  72 GG--VTrrAPQPLNINLIFLLSANfpD-Qya----dGLRVLSAGIGAFQARPLFTPQSDP----Tlpe---gieRLSVEW 137 Dinoroseobacter...

7ADZ_0A      144 FTPTFEELNYIWGTLg-GRQYPSVFYKLNLIVIDRDATTSEE 184 Algoriphagus machipongonensis
Q39WK4       131 HPLGADELNHIWSTQgdVSYRPSIAYEMALAPVLPAERRPES 172 Geobacter metallireducens GS-15
WP_011966853 129 ITISMQELSNIWSILg-GHYYPSILCKARIISFAGTEIKDIK 169 Parabacteroides distasonis
WP_014201681 138 VNLSTSELSHVWSGMg-AKYLPSILYKVRMITFNSDQVDKEI 178 Owenweeksia hongkongensis
Q12JT9       135 ENTQTQELSNMWSMFg-AKYVPSILYKVRMITIDTNAEVTRT 175 Shewanella denitrificans OS217
WP_013319383 137 DSLPRHELGNMWTMLg-IRYLPSAVYRLRVKIADSQAIQSQS 177 Dickeya dadantii
WP_011734323 137 ENLNIRDLSSLWSILs-GKYLPSVLYRVRMVAYDSADILSKA 177 Pelobacter propionicus
WP_012489242 139 ENLNIQDLSNLWGLLg-GKYLPSVYYRVRMIAMTPSAIVGQE 179 Cellvibrio japonicus
WP_015818773 137 QNTDINESTNLWGVLg-GKYLPSVFYKVRLITLRSESVVSRI 177 Teredinibacter turnerae
WP_012179119 138 RDLDLQSIHNLWTVLg-GTYLPSAVYKARMLVVEDGFVGTDV 178 Dinoroseobacter shibae
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap