Conserved Protein Domain Family
Caps_assemb_Wzi

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pfam14052: Caps_assemb_Wzi 
Capsule assembly protein Wzi
Many bacteria are covered in a layer of surface-associated polysaccharide called the capsule. These capsules can be divided into four groups depending upon the organisation of genes responsible for capsule assembly, the assembly pathway and regulation. This family plays a role in group 1 capsule biosynthesis. It is likely to be involved in the later stages of capsule assembly. It is likely to consist of a beta-barrel structure.
Statistics
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PSSM-Id: 493923
Aligned: 28 rows
Threshold Bit Score: 246.845
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:AciX8_2586 184 IGVRQIAGPVLRDSFHLGQsFINDYGRPYSTGFNSYDGFSAIAERGR-FSLYVRGEY-QHAPHydgysfalaqslsiadr 261
CDE07071        50 MAANRYGTLTQGAGAYEALgLHKPMGHNGRFGFAFGVQAWFGASKETdYARYSATEGwEGNNQ----------------- 112
Q0VR46         101 AKQSTRGASITLGVANQEPlY-TSFDTQVEDEQTSQVTLY---GMGDrWAGRLAIGY-VDGDR----------------- 158 Alcanivorax b...
Q8E8H9          98 AVDNRGNARVKVSGATDPArF-QHYGSDYREKGEVKASYE---YLGSrVAYKTTVAE-TYDPQ----------------- 155 Shewanella on...
WP_011758234    88 AVENRGNTRLKAVGATDEArF-QHFGSDYREQGELKASHE---YMDNrFAFKVSATA-AYDAQ----------------- 145 Shewanella am...
WP_013049398    94 AVDNRGNTRIKAAAATDAArF-RHFGSDYREQGDVQVTHE---YVGErFAFKVSASA-HYDPL----------------- 151 Shewanella vi...
Q07W64          95 AVGNRGNTSIKVAAASDEArF-QHFGSDYREKGQLQGSHE---YTGErFSYKISASA-NYNPA----------------- 152 Shewanella fr...
Q12SS0          90 AINNRGNRSMKLATASESArF-QHFGSDYREKAALSGSTE---YLGErFAFKASASM-NYHPD----------------- 147 Shewanella de...
WP_007641997    58 HKKQKGQSVISLYGATDDSrF-VGFNGVQAEKVKLNVTKE---FYAGrWAGQISANH-E--------------------- 111 Paraglaciecol...
WP_014107094    95 QKQEKSRTFLELQASSDDPrL-TSFDGINDIKASAKVTSE---FYWDrLSGQLSVNY-Q--------------------- 148 Glaciecola ni...
jgi:AciX8_2586 262 ipysgfnlqqstipegvlpSQNNFRLLEANVSGHLVGHEISFGKSDAWLGPGLG----GAMAWSNNAEDMYTFRIN---- 333
CDE07071       113 -------------------RPAYAWLQEAYAAVRWRSLFLEAGMRDYNRSIFSNatssGDIVLGENARGIPQARIGfenf 173
Q0VR46         159 -------------------DNEYVRMDDSYLAGIVGNWQLGVGAIDRWWGPGWQ----SSLALSNNARPIPGVWLSr--q 213 Alcanivorax b...
Q8E8H9         156 -------------------DNKNFRLDESYFAVIMGNWIATLGTVEQWWGPGFD----SSLHRSNNARPMQSLSLSr--n 210 Shewanella on...
WP_011758234   146 -------------------DDKDFRLDDSWMSLVLGNWVFTAGTVEQWWGPGFD----TALHKSNNARPMPSLMLSr--n 200 Shewanella am...
WP_013049398   152 -------------------DEEEFRLDDSYLAMALGNWMLTAGAVEQWWGPGFD----SALHRSNNARPLPSVLISr--n 206 Shewanella vi...
Q07W64         153 -------------------DDEEIRLDDSYIAVVLGNWIVTAGSVGQWWGPGFD----SSLHKSNNARPMPSLMISr--n 207 Shewanella fr...
Q12SS0         148 -------------------DDKNLRLDNSYIAMILGNWVFTAGAIEQWWGPGFD----TALHKSTNARPMPSLMMSr--n 202 Shewanella de...
WP_007641997   112 -------------------RGGESHFDQSFLAYQFGDWNLRVGSLNQWWGPAQS----SSLIMSNNARPVPSISFSr--s 166 Paraglaciecol...
WP_014107094   149 -------------------SGGEKNLDNSFLAYQFGEWNVRAGSIDQWWGPAQS----SSLILSNNARPIPTLALSr--s 203 Glaciecola ni...
jgi:AciX8_2586 334 RVEPLNIPWVSrVLGPIRYDFFIGS--LKGHT------DPNspWAHSEMFSFAPTSDFQF----GFQRTIIFGG------ 395
CDE07071       174 VNVPLTRGWLQ-IQGEIAYGKFADKnwLEGHYnrynwyVTTgvWFHYKRLYLRSNPAQPLsvtfGMQHAAQFGGsqqcys 252
Q0VR46         214 MPLAPQSPWLS-WIGPWDLQFIAGR--QEQDRa-----VPDa-hVLGARFVFKPLDSLQI----GLTRLAQWGG------ 274 Alcanivorax b...
Q8E8H9         211 NAAAFETPWLA-WIGPWAFKTGFSM--AEKERa-----VPKt-aEWDMRFTAKPIKQLEV----GLSWSTLFCG------ 271 Shewanella on...
WP_011758234   201 NAAAFETPWLS-WMGPWTLTTGISW--MNDNRa-----VEDt-lLWNFRGTLKPVQQLEI----GASWTVQMCG------ 261 Shewanella am...
WP_013049398   207 NSAAFETPWLS-WLGPWTLTAGISR--LEEDRa-----VANp-lLWNFRSSVRPFRQLEV----GFSWSTQFCG------ 267 Shewanella vi...
Q07W64         208 NSQAFETPWLS-WIGDWSLTGGVSV--TEEDRy-----APHt-lLWNLRGAIKPFRQLEI----GLSWTTQFCG------ 268 Shewanella fr...
Q12SS0         203 NANAFETPWLS-WMGSWNLTAGISV--AEKERf-----APRm-lLWNMRASVKPVQQLEI----GLSWTTQFCG------ 263 Shewanella de...
WP_007641997   167 QAIRSENKWLR-YLGPWFLTAQIGQ--LESQRa-----VPDt-kLWMTRFNFSPVSGLEL----GLSWSAMWGG------ 227 Paraglaciecol...
WP_014107094   204 SAVASESQWLS-WMGPWYFTSQLGQ--LESNRa-----VPDt-kLLLNRFTFSPFKRFEF----GASWAAMWGG------ 264 Glaciecola ni...
jgi:AciX8_2586 396 ------EGHAPvTLHTFLKGFFDINdtdl----atkFSRFD-PGARFSTFNFSYRLPFLrk-svTLYTDSTTHDDVTp-i 462
CDE07071       253 kgvltqTNESKvKIKDFFDVLIPRRdgsg----tqaGDKAYyNGNHLGSWDLQVRYRLPqgqniTFYVQAPWEDGSGigk 328
Q0VR46         275 ------EGRPQ-NFQAFWDATIGRDnge-----ssgFDDDDdPSNQIGGVDFRLSLNPGdv-plGIYGQFIGEDEAG--- 338 Alcanivorax b...
Q8E8H9         272 ------EGQNC-DFDSWWDSVAGNAvcidgsdsclaEQRRD-AGHKTQSIDLRYADTWQdi-pvGLYLEHSCENGSDc-- 340 Shewanella on...
WP_011758234   262 ------EGQDC-GLGTFWDTISGGGecadgsldcdsAQNSR-LGNQMAGWDIRYADTWFnv-pvGLYLERTCEDSSGp-m 331 Shewanella am...
WP_013049398   268 ------EGEEC-SWKSALKSITGQRdcrg----agvEGCTN-YGNQMAGYDVRFSDTWLni-pfGVYYEKTCEDAKGs-a 333 Shewanella vi...
Q07W64         269 ------EGQEC-SFNTAVKSITGQRdcrad--nvdeFGCSN-YGNQMAGFDVRYADTWFdv-pvGLYLERTCEDSKGd-- 335 Shewanella fr...
Q12SS0         264 ------KGQEC-DWDVALKSITGQRdcrad--sadvFGCTN-YGNQMAGFDVRYGDIWFdv-pvGIYLERTCEDSLGd-- 330 Shewanella de...
WP_007641997   228 ------KGQPH-SISDWFKVVTFQTecangaatcddALDSK-LGNHLAGLDFKYTMMWFdr-pfSIYGQRIGEDAVD--- 295 Paraglaciecol...
WP_014107094   265 ------EGQPN-SFSDFIDVITFQAvctrerdvcddSDLTK-QGNHLAGFDAKYTFKLFer-piSVYAQRIGEDAVS--- 332 Glaciecola ni...
jgi:AciX8_2586 463 SAPRRA-GWRPGIYFSHL-PYAPKLDLRIEGVYTdyptl----------------rsqgGEGNYDE-QIEVQGYTNKGFI 523
CDE07071       329 LNGWDG---VWGLRYESAaATGWITEASVEYIDFtnqsgpmhwapgdypgtgvpneatgADDYYNN-YFFN-GWMNNGMG 403
Q0VR46         339 GLPSKR-SSLAGIDIVTG-WGKGSQRFFAEATETvagsw---------------fgdrrHNVMYEH-STYKTGFRYHGRN 400 Alcanivorax b...
Q8E8H9         341 -------GSLWGIDSHFG-TAGKQFKLFMEYSDTfvec------------------ggkANCFYED-PVYLSGARYYGRA 393 Shewanella on...
WP_011758234   332 PWDLADcAKLAGVDTRFG-FKDHQYKLFLEYTDTlvacg---------------sddnvFNCFYEH-TTYLSGSRYYRRS 394 Shewanella am...
WP_013049398   334 PWDIVDcSHLGGLDTRFN-FDAAQFKLFFEYTDTlvacg---------------eddnaFNCMYEHaTTYKSGSRYYGKT 397 Shewanella vi...
Q07W64         336 PWQIVDcGKMVGADTRFS-IAKQQYKLFIEYTDTmvycg---------------edknqFNCFYEH-STYQSGSRYYGRA 398 Shewanella fr...
Q12SS0         331 PWQITDcGKMVGVDTRFN-FAKQQYKLFAEYTDTlvycg---------------adansFNCFYEH-STYLSGNRHYGRA 393 Shewanella de...
WP_007641997   296 YYRVTDnANLMGLS-----TYLWGNKVFIESSDTnvacsn--------------agtneKNCYYEH-ETYQSGYRRYDRA 355 Paraglaciecol...
WP_014107094   333 GINITDqANLFGISTYFA-----NAKVFLESSDTnitcag--------------dgstiTNCYYEN-GVYTSGYRYRGRA 392 Glaciecola ni...
jgi:AciX8_2586 524 MGDWIGREA---KGGQAWLTY------HLSGNEFISLQYLNKKNAK-----------DFIPSGttq----ntFRLDITKR 579
CDE07071       404 LGSPLVKAPiynTDGYMRFTDnrirgfHVGIKGQPVADWSWRLLTGyqrs----lgtPFLPRLkaahsysllLEAGHSFR 479
Q0VR46         401 LASTWEGDA---KVTTLGVQQ------FFRNDVTVSLSLSRATLNDegstravlhidGDEILQaadeqditlAELRIGHP 471 Alcanivorax b...
Q8E8H9         394 LGSTYDSDA---QVFVLGLVG------QFHNSRGFTSLLRYAKLNKdgtnv--attwAPQPPKedl----lmLELSYRMP 458 Shewanella on...
WP_011758234   395 LGSTYDSDA---ETWVLGLIG------QFGDSKGINAYLRYAQLNKdgknh--ssewTPQPEKedl----lmLEVSYRQP 459 Shewanella am...
WP_013049398   398 YGSTYESDA---TVYALGLIG------QFKDSKGITSILRYAQLNKdgssp--atewVAQRAQedl----lmLELSYRMP 462 Shewanella vi...
Q07W64         399 FGSTYDSDA---NVYALGLIG------QFDNSHGFTSILRYAQLNKdganr--ggvwAPQPLKedi----mmLELSYRLP 463 Shewanella fr...
Q12SS0         394 LGSTYDSDA---NTYVLGLIG------QFANSQGFTALLRYAKLNDdgsnr--ggnwAPQPLKedl----tmAEVSYRLP 458 Shewanella de...
WP_007641997   356 IGSSFDSDA---KMLTLGINK------NFRDGDLFELVINQLTLNKdk--------qKPAPVLngmseeilrL-SGFYQA 417 Paraglaciecol...
WP_014107094   393 IGSTFDSDA---KQVTVGANI------RFDGGAIAEVILRKAELNPdg--------tRPSPVLtddvtedllQLSGFYQR 455 Glaciecola ni...
jgi:AciX8_2586 580 IRPD-IELSAYIQNERWKAPIYKSGLQS 606
CDE07071       480 KIPG-LKAAAQVAMDAGSLFGHRYGVAL 506
Q0VR46         472 LLGGrLNWLLSTTNEAVVTYEKRERFTa 499 Alcanivorax borkumensis SK2
Q8E8H9         459 VWKG-M-WSVGGTVSRSEFEVQDNDTNA 484 Shewanella oneidensis
WP_011758234   460 MFKG-M-VTLGGTVSRSEFDTKTDNDAt 485 Shewanella amazonensis
WP_013049398   463 LLKG-M-MSVGGTVSRSEFETQESESDa 488 Shewanella violacea
Q07W64         464 MFNG-M-LTLGGSVANSEFEVQDDDTQG 489 Shewanella frigidimarina NCIMB 400
Q12SS0         459 MLKG-M-VTVGGTVSQSKFVTEKDETNA 484 Shewanella denitrificans OS217
WP_007641997   418 AYGD-WLVKLGASIERGEVDDADAKTDA 444 Paraglaciecola psychrophila
WP_014107094   456 PFGD-WLLKAGGSIESRKFVTQDNEVDA 482 Glaciecola nitratireducens
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