Conserved Protein Domain Family
Caps_assemb_Wzi

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pfam14052: Caps_assemb_Wzi (This model is not part of the current CDD release)
Capsule assembly protein Wzi
Many bacteria are covered in a layer of surface-associated polysaccharide called the capsule. These capsules can be divided into four groups depending upon the organisation of genes responsible for capsule assembly, the assembly pathway and regulation. This family plays a role in group 1 capsule biosynthesis. It is likely to be involved in the later stages of capsule assembly. It is likely to consist of a beta-barrel structure.
Statistics
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PSSM-Id: 493923
Aligned: 28 rows
Threshold Bit Score: 246.845
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014265774 184 IGVRQIAGPVLRDSFHLGQsFINDYGRPYSTGFNSYDGFSAIAERGR-FSLYVRGEY-QHAPHydgysfalaqslsiadr 261 Granulicella ma...
CDE07071      50 MAANRYGTLTQGAGAYEALgLHKPMGHNGRFGFAFGVQAWFGASKETdYARYSATEGwEGNNQ----------------- 112
Q0VR46       101 AKQSTRGASITLGVANQEPlY-TSFDTQVEDEQTSQVTLY---GMGDrWAGRLAIGY-VDGDR----------------- 158 Alcanivorax bor...
Q8E8H9        98 AVDNRGNARVKVSGATDPArF-QHYGSDYREKGEVKASYE---YLGSrVAYKTTVAE-TYDPQ----------------- 155 Shewanella onei...
WP_011758234  88 AVENRGNTRLKAVGATDEArF-QHFGSDYREQGELKASHE---YMDNrFAFKVSATA-AYDAQ----------------- 145 Shewanella amaz...
WP_013049398  94 AVDNRGNTRIKAAAATDAArF-RHFGSDYREQGDVQVTHE---YVGErFAFKVSASA-HYDPL----------------- 151 Shewanella viol...
Q07W64        95 AVGNRGNTSIKVAAASDEArF-QHFGSDYREKGQLQGSHE---YTGErFSYKISASA-NYNPA----------------- 152 Shewanella frig...
Q12SS0        90 AINNRGNRSMKLATASESArF-QHFGSDYREKAALSGSTE---YLGErFAFKASASM-NYHPD----------------- 147 Shewanella deni...
WP_007641997  58 HKKQKGQSVISLYGATDDSrF-VGFNGVQAEKVKLNVTKE---FYAGrWAGQISANH-E--------------------- 111 Paraglaciecola ...
WP_014107094  95 QKQEKSRTFLELQASSDDPrL-TSFDGINDIKASAKVTSE---FYWDrLSGQLSVNY-Q--------------------- 148 Glaciecola nitr...
WP_014265774 262 ipysgfnlqqstipegvlpSQNNFRLLEANVSGHLVGHEISFGKSDAWLGPGLG----GAMAWSNNAEDMYTFRIN---- 333 Granulicella ma...
CDE07071     113 -------------------RPAYAWLQEAYAAVRWRSLFLEAGMRDYNRSIFSNatssGDIVLGENARGIPQARIGfenf 173
Q0VR46       159 -------------------DNEYVRMDDSYLAGIVGNWQLGVGAIDRWWGPGWQ----SSLALSNNARPIPGVWLSr--q 213 Alcanivorax bor...
Q8E8H9       156 -------------------DNKNFRLDESYFAVIMGNWIATLGTVEQWWGPGFD----SSLHRSNNARPMQSLSLSr--n 210 Shewanella onei...
WP_011758234 146 -------------------DDKDFRLDDSWMSLVLGNWVFTAGTVEQWWGPGFD----TALHKSNNARPMPSLMLSr--n 200 Shewanella amaz...
WP_013049398 152 -------------------DEEEFRLDDSYLAMALGNWMLTAGAVEQWWGPGFD----SALHRSNNARPLPSVLISr--n 206 Shewanella viol...
Q07W64       153 -------------------DDEEIRLDDSYIAVVLGNWIVTAGSVGQWWGPGFD----SSLHKSNNARPMPSLMISr--n 207 Shewanella frig...
Q12SS0       148 -------------------DDKNLRLDNSYIAMILGNWVFTAGAIEQWWGPGFD----TALHKSTNARPMPSLMMSr--n 202 Shewanella deni...
WP_007641997 112 -------------------RGGESHFDQSFLAYQFGDWNLRVGSLNQWWGPAQS----SSLIMSNNARPVPSISFSr--s 166 Paraglaciecola ...
WP_014107094 149 -------------------SGGEKNLDNSFLAYQFGEWNVRAGSIDQWWGPAQS----SSLILSNNARPIPTLALSr--s 203 Glaciecola nitr...
WP_014265774 334 RVEPLNIPWVSrVLGPIRYDFFIGS--LKGHT------DPNspWAHSEMFSFAPTSDFQF----GFQRTIIFGG------ 395 Granulicella ma...
CDE07071     174 VNVPLTRGWLQ-IQGEIAYGKFADKnwLEGHYnrynwyVTTgvWFHYKRLYLRSNPAQPLsvtfGMQHAAQFGGsqqcys 252
Q0VR46       214 MPLAPQSPWLS-WIGPWDLQFIAGR--QEQDRa-----VPDa-hVLGARFVFKPLDSLQI----GLTRLAQWGG------ 274 Alcanivorax bor...
Q8E8H9       211 NAAAFETPWLA-WIGPWAFKTGFSM--AEKERa-----VPKt-aEWDMRFTAKPIKQLEV----GLSWSTLFCG------ 271 Shewanella onei...
WP_011758234 201 NAAAFETPWLS-WMGPWTLTTGISW--MNDNRa-----VEDt-lLWNFRGTLKPVQQLEI----GASWTVQMCG------ 261 Shewanella amaz...
WP_013049398 207 NSAAFETPWLS-WLGPWTLTAGISR--LEEDRa-----VANp-lLWNFRSSVRPFRQLEV----GFSWSTQFCG------ 267 Shewanella viol...
Q07W64       208 NSQAFETPWLS-WIGDWSLTGGVSV--TEEDRy-----APHt-lLWNLRGAIKPFRQLEI----GLSWTTQFCG------ 268 Shewanella frig...
Q12SS0       203 NANAFETPWLS-WMGSWNLTAGISV--AEKERf-----APRm-lLWNMRASVKPVQQLEI----GLSWTTQFCG------ 263 Shewanella deni...
WP_007641997 167 QAIRSENKWLR-YLGPWFLTAQIGQ--LESQRa-----VPDt-kLWMTRFNFSPVSGLEL----GLSWSAMWGG------ 227 Paraglaciecola ...
WP_014107094 204 SAVASESQWLS-WMGPWYFTSQLGQ--LESNRa-----VPDt-kLLLNRFTFSPFKRFEF----GASWAAMWGG------ 264 Glaciecola nitr...
WP_014265774 396 ------EGHAPvTLHTFLKGFFDINdtdl----atkFSRFD-PGARFSTFNFSYRLPFLrk-svTLYTDSTTHDDVTp-i 462 Granulicella ma...
CDE07071     253 kgvltqTNESKvKIKDFFDVLIPRRdgsg----tqaGDKAYyNGNHLGSWDLQVRYRLPqgqniTFYVQAPWEDGSGigk 328
Q0VR46       275 ------EGRPQ-NFQAFWDATIGRDnge-----ssgFDDDDdPSNQIGGVDFRLSLNPGdv-plGIYGQFIGEDEAG--- 338 Alcanivorax bor...
Q8E8H9       272 ------EGQNC-DFDSWWDSVAGNAvcidgsdsclaEQRRD-AGHKTQSIDLRYADTWQdi-pvGLYLEHSCENGSDc-- 340 Shewanella onei...
WP_011758234 262 ------EGQDC-GLGTFWDTISGGGecadgsldcdsAQNSR-LGNQMAGWDIRYADTWFnv-pvGLYLERTCEDSSGp-m 331 Shewanella amaz...
WP_013049398 268 ------EGEEC-SWKSALKSITGQRdcrg----agvEGCTN-YGNQMAGYDVRFSDTWLni-pfGVYYEKTCEDAKGs-a 333 Shewanella viol...
Q07W64       269 ------EGQEC-SFNTAVKSITGQRdcrad--nvdeFGCSN-YGNQMAGFDVRYADTWFdv-pvGLYLERTCEDSKGd-- 335 Shewanella frig...
Q12SS0       264 ------KGQEC-DWDVALKSITGQRdcrad--sadvFGCTN-YGNQMAGFDVRYGDIWFdv-pvGIYLERTCEDSLGd-- 330 Shewanella deni...
WP_007641997 228 ------KGQPH-SISDWFKVVTFQTecangaatcddALDSK-LGNHLAGLDFKYTMMWFdr-pfSIYGQRIGEDAVD--- 295 Paraglaciecola ...
WP_014107094 265 ------EGQPN-SFSDFIDVITFQAvctrerdvcddSDLTK-QGNHLAGFDAKYTFKLFer-piSVYAQRIGEDAVS--- 332 Glaciecola nitr...
WP_014265774 463 SAPRRA-GWRPGIYFSHL-PYAPKLDLRIEGVYTdyptl----------------rsqgGEGNYDE-QIEVQGYTNKGFI 523 Granulicella ma...
CDE07071     329 LNGWDG---VWGLRYESAaATGWITEASVEYIDFtnqsgpmhwapgdypgtgvpneatgADDYYNN-YFFN-GWMNNGMG 403
Q0VR46       339 GLPSKR-SSLAGIDIVTG-WGKGSQRFFAEATETvagsw---------------fgdrrHNVMYEH-STYKTGFRYHGRN 400 Alcanivorax bor...
Q8E8H9       341 -------GSLWGIDSHFG-TAGKQFKLFMEYSDTfvec------------------ggkANCFYED-PVYLSGARYYGRA 393 Shewanella onei...
WP_011758234 332 PWDLADcAKLAGVDTRFG-FKDHQYKLFLEYTDTlvacg---------------sddnvFNCFYEH-TTYLSGSRYYRRS 394 Shewanella amaz...
WP_013049398 334 PWDIVDcSHLGGLDTRFN-FDAAQFKLFFEYTDTlvacg---------------eddnaFNCMYEHaTTYKSGSRYYGKT 397 Shewanella viol...
Q07W64       336 PWQIVDcGKMVGADTRFS-IAKQQYKLFIEYTDTmvycg---------------edknqFNCFYEH-STYQSGSRYYGRA 398 Shewanella frig...
Q12SS0       331 PWQITDcGKMVGVDTRFN-FAKQQYKLFAEYTDTlvycg---------------adansFNCFYEH-STYLSGNRHYGRA 393 Shewanella deni...
WP_007641997 296 YYRVTDnANLMGLS-----TYLWGNKVFIESSDTnvacsn--------------agtneKNCYYEH-ETYQSGYRRYDRA 355 Paraglaciecola ...
WP_014107094 333 GINITDqANLFGISTYFA-----NAKVFLESSDTnitcag--------------dgstiTNCYYEN-GVYTSGYRYRGRA 392 Glaciecola nitr...
WP_014265774 524 MGDWIGREA---KGGQAWLTY------HLSGNEFISLQYLNKKNAK-----------DFIPSGttq----ntFRLDITKR 579 Granulicella ma...
CDE07071     404 LGSPLVKAPiynTDGYMRFTDnrirgfHVGIKGQPVADWSWRLLTGyqrs----lgtPFLPRLkaahsysllLEAGHSFR 479
Q0VR46       401 LASTWEGDA---KVTTLGVQQ------FFRNDVTVSLSLSRATLNDegstravlhidGDEILQaadeqditlAELRIGHP 471 Alcanivorax bor...
Q8E8H9       394 LGSTYDSDA---QVFVLGLVG------QFHNSRGFTSLLRYAKLNKdgtnv--attwAPQPPKedl----lmLELSYRMP 458 Shewanella onei...
WP_011758234 395 LGSTYDSDA---ETWVLGLIG------QFGDSKGINAYLRYAQLNKdgknh--ssewTPQPEKedl----lmLEVSYRQP 459 Shewanella amaz...
WP_013049398 398 YGSTYESDA---TVYALGLIG------QFKDSKGITSILRYAQLNKdgssp--atewVAQRAQedl----lmLELSYRMP 462 Shewanella viol...
Q07W64       399 FGSTYDSDA---NVYALGLIG------QFDNSHGFTSILRYAQLNKdganr--ggvwAPQPLKedi----mmLELSYRLP 463 Shewanella frig...
Q12SS0       394 LGSTYDSDA---NTYVLGLIG------QFANSQGFTALLRYAKLNDdgsnr--ggnwAPQPLKedl----tmAEVSYRLP 458 Shewanella deni...
WP_007641997 356 IGSSFDSDA---KMLTLGINK------NFRDGDLFELVINQLTLNKdk--------qKPAPVLngmseeilrL-SGFYQA 417 Paraglaciecola ...
WP_014107094 393 IGSTFDSDA---KQVTVGANI------RFDGGAIAEVILRKAELNPdg--------tRPSPVLtddvtedllQLSGFYQR 455 Glaciecola nitr...
WP_014265774 580 IRPD-IELSAYIQNERWKAPIYKSGLQS 606 Granulicella mallensis
CDE07071     480 KIPG-LKAAAQVAMDAGSLFGHRYGVAL 506
Q0VR46       472 LLGGrLNWLLSTTNEAVVTYEKRERFTa 499 Alcanivorax borkumensis SK2
Q8E8H9       459 VWKG-M-WSVGGTVSRSEFEVQDNDTNA 484 Shewanella oneidensis
WP_011758234 460 MFKG-M-VTLGGTVSRSEFDTKTDNDAt 485 Shewanella amazonensis
WP_013049398 463 LLKG-M-MSVGGTVSRSEFETQESESDa 488 Shewanella violacea
Q07W64       464 MFNG-M-LTLGGSVANSEFEVQDDDTQG 489 Shewanella frigidimarina NCIMB 400
Q12SS0       459 MLKG-M-VTVGGTVSQSKFVTEKDETNA 484 Shewanella denitrificans OS217
WP_007641997 418 AYGD-WLVKLGASIERGEVDDADAKTDA 444 Paraglaciecola psychrophila
WP_014107094 456 PFGD-WLLKAGGSIESRKFVTQDNEVDA 482 Glaciecola nitratireducens
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