Conserved Protein Domain Family
DUF4238

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pfam14022: DUF4238 
Protein of unknown function (DUF4238)
This family of proteins is functionally uncharacterised. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 274 and 374 amino acids in length.
Statistics
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PSSM-Id: 493895
Aligned: 45 rows
Threshold Bit Score: 104.077
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_013957553   3 YQHFIPQFILRNYSYPlkcpnaekkgkkkckckhekgkypGDLVTNCVDLTLSPFRl-eTYSVKRIFGAPNMYNdpak-- 79 
Q24NM4         6 YHHLIPKTYLKSWCFS-------------------------GMSVYSFNKAELSKPv--VKNLKNNFGENNYHSikagmp 58  Desulfitobacter...
EHR71040      43 qQHYVSRFYLKGFA--------------------------QNRRVAVYDRTTGVVD---SATPKNAASIEHLYTfid--- 90 
3_pfamImport   1 RHHKIPHFYLDQWKDPc----------------------sEKSTIWIFNKDSLDCS---PRLTKDAFVEGHYFTeqe--- 52 
WP_014810009  10 KQHYVPRFYLKSWLi------------------------pGLDKVWTYDLYHNKIK---NLSPSSIVFENYYYEhd---- 58  Desulfomonile t...
WP_013236025   6 RHHFVPKAYLRAFESS-------------------------DGKVLVYRKDEPGKIl--RVNPDGTGFERYYYSqptp-- 56  Herbaspirillum ...
WP_014021326   6 KHHFVPKFLLKPWTYD-------------------------EKNLWLYLKSNIEVSp-rSASIADVGHEKNLYTsr---- 55  Cyclobacterium ...
WP_012384436   6 KHHYIPQFYLKNWCGE-------------------------DGRLICYKRIRSEVMc-ePVAPISTGFQKDLYTlah--- 56  Beijerinckia in...
Q89SV5       117 RHHYIPQFYLRRWAGD-------------------------DDKICEFSRPHKNIHr-qRVYPIQTAFKDRLYEkpg--- 167 Bradyrhizobium ...
WP_012029912   6 dHHYIPVFYLNHWCGP-------------------------NEKLVEYARPIGRKVvvkDVGPKATGFKRDLYAfld--- 57  Bradyrhizobium ...
XP_013957553  80 ---------------------------------------------------------------atsDEQRRIE-CMFSK- 94 
Q24NM4        59 ccteedlikifeplkntkvvldgkeleslyeynryyydfenwelfypenvrvpkaevnkindnienNKVLDIE-KLWNVk 137 Desulfitobacter...
EHR71040      91 ---------------------------------------------------------------egdRQRFELE-ALFGL- 105
3_pfamImport  53 ---------------------------------------------------------------ldgTRHAPLE-NYLNR- 67 
WP_014810009  59 ----------------------------------------------------------------rdFPDNSIE-DVLKK- 72  Desulfomonile t...
WP_013236025  57 ---------------------------------------------------------------egsIDHNRLE-DMFSV- 71  Herbaspirillum ...
WP_014021326  56 ------------------------------------------------------------------ggDKSVEtDFFSK- 68  Cyclobacterium ...
WP_012384436  57 ---------------------------------------------------------------lpkNLRQAIEkDVTAD- 72  Beijerinckia in...
Q89SV5       168 ---------------------------------------------------------------vpkSIAQQVEdKFMSP- 183 Bradyrhizobium ...
WP_012029912  58 ---------------------------------------------------------------lpeETAQFLEsHFLAK- 73  Bradyrhizobium ...
XP_013957553  95 MESHASILFRR----IVKthe-------egsTVVTLTRIERNLIRKFLFLLKYRG--------SGFHqrfyhdkpedycs 155
Q24NM4       138 YENGWNSLLQF----IEQklk--------gtADQEIDEFYKGKLMKFIVSLNWRSfisneslrESFSfintlvdlkdiei 205 Desulfitobacter...
EHR71040     106 VESRAGTALKS----AVS--------------RSPLSFEDREYLALFVAMHAIRT--------PAALaeagsvrekakha 159
3_pfamImport  68 NETIAATLLPR----LEAndpl-----teydGETPLPAADRNVLRQFIVGLFVRS--------AWWRellphvisyanak 130
WP_014810009  73 MEDKTAPILQEmnsiVQQhpnfsqekqltraLQDFLVEEKRKQIKEFAAYQYLRI--------PGAMerkayelipakip 144 Desulfomonile t...
WP_013236025  72 IEGKWPPVVER----MGR---------------RENVNESLLDIFEFILLQRVRV--------PASRdat---------- 114 Herbaspirillum ...
WP_014021326  69 IDGNASAVFKN----IIEn------------EKRKLDHEDKIPLIHFVNTFHIRS--------PELI------------- 111 Cyclobacterium ...
WP_012384436  73 VDHRASVALQK----MIAt-----------kSTDTLTKEDRLGWAQFIVSLPIRN--------PDAVadiketstkagle 129 Beijerinckia in...
Q89SV5       184 VDNFAAKALDV----IEAg-----------vEKVRNDAERRSAWSLFLMSLMMRM--------PEDVaalaqieedqwkl 240 Bradyrhizobium ...
WP_012029912  74 ADELASIVHKK----LLLg------------TATPWTPEIRSAWSRFVMNFLVRH--------PDPFaeikavahaawlq 129 Bradyrhizobium ...
XP_013957553 156 ---------------------ndrellleymrehHFSTPRD----------------------VWYHNLETIMNLEMDSE 192
Q24NM4       206 pfdernvkrnktasdemkhnyllklfrsflndegLMYDIAK--------------------------------------- 246 Desulfitobacter...
EHR71040     160 rlkltva-------seaaaykllkeskpadtseaELRRLAA-------------------------KMFEMVSGDHFRIS 207
3_pfamImport 131 tnqevk---------srtqreleqdlrqqgfnrtDRRKALRenkkkqpsidsslqeltaswitKVHPQFIINASNQLELA 201
WP_014810009 145 de------------------elreqlkpanfvttGFDYVRN----------------------KFFQKLRMLLSCSFDYE 184 Desulfomonile t...
WP_013236025 115 --------------------------------eaKLAAQVK----------------------ATFKHLLAKGSIPAPPE 140 Herbaspirillum ...
WP_014021326 112 ---------------------------------------------------------------NEIRNFNNSGGKREKVE 128 Cyclobacterium ...
WP_012384436 130 kayeqak-------qefpdwaqgetfgaefeesvREDPFTR----------------------FLSDNYGLMVISELMLN 180 Beijerinckia in...
Q89SV5       241 dlp---------------slrekyaanrkpddpeTIEEFIEkr------------------dpEYIGRWVMNGLPELTHH 287 Bradyrhizobium ...
WP_012029912 130 pdg---------------itqqryeelrrpddpaTFEEWVLaq------------------geHLADRIRIRLIQSVMDN 176 Bradyrhizobium ...
XP_013957553 193 ----------------------------GKWMAKLLQNMFPDDALWFIMHTEQYYMAICTTSEVADeFILTENcynvfeg 244
Q24NM4       247 ------------------------------------------------GYIKNLTLRLLISSGDIQ-FITSDN------- 270 Desulfitobacter...
EHR71040     208 ------------------------------VPDEAARAAALKTWDTVSRTLFERDWTVVHAPNGSE-YITSDS------- 249
3_pfamImport 202 -----------------------------------------------------KTLPFTIVRVEGLpLLTSDTpciieed 228
WP_014810009 185 -------------------------------------------------------------------FLTSDW------- 190 Desulfomonile t...
WP_013236025 141 slrgr------------------ldevlVSIDPHKSIHGMVDDINAARDVFDRIGLSVVHNMTDVP-FLTSDN------- 194 Herbaspirillum ...
WP_014021326 129 iksnltekgnasrkvfekdphddipkiiRLFSTIGESTAMSKIYEHEFLKLISSNMMIYENNSKYD-FITSDF------- 200 Cyclobacterium ...
WP_012384436 181 --------------------------------------------PDYHDIILKMFWWVMDFSSAGIsLITCDR------- 209 Beijerinckia in...
Q89SV5       288 --------------------------------------------EGIGQLLNAMRWCVVVTPDDAPpFLTSDR------- 316 Bradyrhizobium ...
WP_012029912 177 --------------------------------------------IRVGGRLNGMNWNVLDLSASRFrLLTSDW------- 205 Bradyrhizobium ...
XP_013957553 245 PNTFTRNKDTGQVTGSSHAGF------HLFAPISPRLIIVLRCLALPSPEedyqlevsqarhdalwssfqniygpdwksl 318
Q24NM4       271 PSFLYKENDRI----------------HHIMPVTPQILISVEKDSLHRGKy----------------------------- 305 Desulfitobacter...
EHR71040     250 PVVLSPLSNTEHLPLGYGSLHt-----HVLFPLSRTAALVMNGDERRMR------------------------------- 293
3_pfamImport 229 PSIFQ-------------LHRekvlgsAFICPLTPHLAFVGALGLKDE-------------------------------- 263
WP_014810009 191 PCFDF---MHSPYAPALGVDIgnsrgvFLIFPLLPRVLLTLFSRSISPGVlspp-------------------------- 241 Desulfomonile t...
WP_013236025 195 PVIWLDPSIHPDDIEPYAIKKgg--pvLLLFPISPSLLILGSTDYKEIFSkhg--------------------------- 245 Herbaspirillum ...
WP_014021326 201 PLRVINLSKEESFGVELPSLF------GMILPLSPKLCLIISNDSDFITEi----------------------------- 245 Cyclobacterium ...
WP_012384436 210 PYMIFRSIGHPRG--------------LIYLPIGPRLGFFASPDPMKRRQl----------------------------- 246 Beijerinckia in...
Q89SV5       317 PLFMSKTFSEAEC--------------YLTLPIGPHRLFVATNTEETERKf----------------------------- 353 Bradyrhizobium ...
WP_012029912 206 PLFRElkg----------------ermLFALPISPTKLFTAVTHPDILQKm----------------------------- 240 Bradyrhizobium ...
XP_013957553 319 ledlpikkcrnnyseiingeahplagydgkhrptdkfhftYHPIGSEYVNIINNIFLENAYntSLIAYRNQE 390
Q24NM4       306 ---------------------------------------cVEHIPDDEVERFNLIIINNAD--EFVISRNAS 336 Desulfitobacterium hafn...
EHR71040     294 ----------------------------------------HADVRPEQVERFNAAVAADCY--RYVMGSSAE 323
3_pfamImport 264 ----------------------------------------YATFDSNWSRLFNARIRANAQ--KELIANTKD 293
WP_014810009 242 -------------------------------------epiVRPISAGEVRNTNTLTIQQAR--RWVIYNKNv 274 Desulfomonile tiedjei
WP_013236025 246 -------------------------------------lqySETREDGWVRQINETVCRFAY--KAVYASSPG 278 Herbaspirillum seropedicae
WP_014021326 246 ----------------------------------------ISFKQKEFVKQTNIETINTAN--NQIFSKEKT 275 Cyclobacterium marinum
WP_012384436 247 ----------------------------------------LNQNIALVTKEMNRWEAKLAA--QYVYAADRH 276 Beijerinckia indica
Q89SV5       354 ----------------------------------------KDWPPKELALEVNSQVAKQAV--KYVYGLDHS 383 Bradyrhizobium japonicum
WP_012029912 241 ----------------------------------------RQEKPDEVVKTMNAATVAAAR--RFVYASDRS 270 Bradyrhizobium sp. ORS 278
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