4KWA,3E7Q


Conserved Protein Domain Family
TetR_C_6

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pfam13977: TetR_C_6 (This model is not part of the current CDD release)
BetI-type transcriptional repressor, C-terminal
This family comprises the C-terminal portion of proteins that belong to the TetR family of transcriptional regulators. The C terminus represents the regulatory region, and does not include the DNA binding helix-turn-helix domain. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. One of the target proteins is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.
Statistics
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PSSM-Id: 521023
Aligned: 93 rows
Threshold Bit Score: 38.0561
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4KWA_A         77 A----RERLVRLVELQLP-TPGLLRDEWSVWLQVWTES-TLNPKIRDLYNDAYDRWYQTIAXTIRTGQK--QGVFRDQDA 148 Saccharomonosp...
Q2SAS8         82 P----QQQLRAFVDARLAlGKGADPEAVKAWVLIGAEA-VRVDDVRELYCEAIAMQMKELAQLLWNIAG---DRLAAEDI 153 Hahella chejue...
Q1AV71         92 A----EEKVSAMVDAIFI-DPASNRSFYLVFFDFLGHA-ARTDRFGDVGATFQEIVTGLYDEVVR-LGReeGVFRVG-DT 163 Rubrobacter xy...
WP_012693340   85 P----DAKLVAFVENQFF-GVENTRRFYTVSLDFLAAA-TRDPELMAVQRDF-VRETLELDLELARLAG-------EDGA 150 Deinococcus de...
4_pfamImport    1 PaastAERGLSAWSAMLE-GLVRERELVVSYLEALAQA-EREPVLREQFAEQYRRCRARVAELVAESLGe-GARPDDPSV 77 
Q2G7M9        159 A----EERLRLIVVMCLD-DIAGKR-TTRLFTELWALA-NHNEFVADRVRLFYQRVHEFIAEYVRELNP----ALGEQEV 227 Novosphingobiu...
jgi:Hmuk_1806  91 P----EQRLDLLIDKLIA-DAEDHQDLLIAMLEMRSQA-PYNETFGERFQQNDEYVRYMLRTVIDHGVR--EGVFSPVDS 162
Q5V649         82 P----EARLNLLLDELLV-KPQENPDLSVALLEMRSQA-PYKEAFSDRFRQNDEYVRYMLKAVINHGID--EGVFTDVDA 153 Haloarcula mar...
Q9HRF3         82 P----ETRLSLLLDELLV-DPQPNQALSVALLEMRAQA-PYNEPFRERFQQNDEYTRFMLKSVISHGID--EGAFEAVDA 153 Halobacterium ...
jgi:Gobs_1647  79 P----GEWLRAVGDELVStGEERRP-ASVIWLVRMARAaVHEP-TAEVHRREWQQVEDLLAQLVAAARP----DLAEEAV 148
4KWA_A        149 DELATRLSALIDGLGIQVLTGKRGCS--VDHXRQHLNDFIEH 188 Saccharomonospora viridis DSM 43017
Q2SAS8        154 RKLAAMVLATMEGAYQLAVTNPDSMP--KNFAAEMVMETIVK 193 Hahella chejuensis KCTC 2396
Q1AV71        164 REAATVVRALIDGLFTQWVLE-RDWErtHARYRGLCKRAVLS 204 Rubrobacter xylanophilus DSM 9941
WP_012693340  151 ERRARQLRALVEGLSVRFVAD-PAPD--LELYRADCVAGVQA 189 Deinococcus deserti
4_pfamImport   78 KAVASFVIAVCDGLAVQWVLDPDELP--TGEEL---RSGVRT 114
Q2G7M9        228 RDVALFISASMEGATPFLGYE-KPW---AQRMQAFTAIAAHS 265 Novosphingobium aromaticivorans DSM 12444
jgi:Hmuk_1806 163 EHVARALMTIVDGARTRAVVLdEEDT--LATARQTAAEYVDA 202
Q5V649        154 EHVTRSLLTIIDGARTRAVMLdDTEE--LETARQTASEYADA 193 Haloarcula marismortui
Q9HRF3        154 DHVARSLMTIVDGARTRSVVHGDPSA--LAAGRRTASEYVDA 193 Halobacterium salinarum
jgi:Gobs_1647 149 RDEATVLLALLDGLAGAVAVEPGRVP--AERAEALVARHLDA 188
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