3RH2


Conserved Protein Domain Family
TetR

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pfam13972: TetR (This model is not part of the current CDD release)
Bacterial transcriptional repressor
This family of bacterial transcriptional repressors is characterised by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The regulatory network in which TetR itself is involved is in being released in the presence of tetracycline, binding to the target operator, and repressing tetA transcription.
Statistics
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PSSM-Id: 521019
Aligned: 63 rows
Threshold Bit Score: 91.5373
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3RH2_A        58 YEQHLLLGFKPYADQk-------vDLELLXSYFDAXFYTXWQFRFXYANLADILARDDTLKARYLKVQQAVLEQSIAVLN 130 Shewanella amaz...
WP_375578214  57 MQKNVEQQFKNIKEEv-------iNLEFMLSRLKILFEEIYKYKFIYLGITKVVRHFDHIKKHAQDQFDQRWNILDTISG 129 Marivirga tract...
WP_013455131  58 LVEEMDNQMKSMELDn--------QLESLYKSSIKTMEKMYDYKFILIDFIHLMNENKKIKSHYAALMKFRNEQFQSVFR 129 Marivirga tract...
WP_014020546  59 hANALTEEIDKPSF----------TLEKLFTTIVNIFKLQMKYRYLMLNLSALIQSNETIKDKYLELTALRKAQLIHLFS 128 Cyclobacterium ...
WP_013767634  62 ldalILESMQLASIQgidlhftfqSIER-------SFTTFQHYKFLMLDFADIMRRHETLKAHFRQLAGQRQVQFMQLIQ 134 Haliscomenobact...
WP_013766841  68 FKDMMEAP----------------TFENINVQLDSLIDLAQKYLFIQLDGPYIMRNYPVLAELQRQFYENSMNFVKMAIN 131 Haliscomenobact...
WP_008202551  61 MRNEMSESYVTRDPEi-------sAIGHFHLLIQQLEEFQYKYRFFNLDVLEVTRSFPNVSKIIQETFIKRKETTIQLFQ 133 Algoriphagus ma...
WP_015265092  63 MRKEMGASYEIATGSt-------sSFADFHKLLLHLEAFQFKYRFFNQDVLEISRSYPEVSQLLKETIGLRNKQMADFFE 135 Echinicola viet...
4_pfamImport   2 YEETLDYILPENSYI---------TLFHFEEMMLKFDDLQQRYCFFFNDIVHIIKTYPEIAKKYEASNLIRFKDARKLID 72 
Q6LR00        53 liseLQNSVSTISNEypk---qvqDFDDYWPFMHTVMALFTHYRFMFRNLDNLNGQNPQIKRKIRSLILKLRQLSSDMLA 129 Photobacterium ...
3RH2_A       131 QLKKDGILQ--IEDERIADLADTIKXIIGFWISYklTQSSIATISKASLYEGLLRVLXIFKAYSTPDSLANF 200 Shewanella amazonensis ...
WP_375578214 130 FLIANGYMKafKDNGQKDMLIHALLMVSNSWISD--AEVFYKGKDSEKIDYYMQVFFNLVRPTLTEKGLEGF 199 Marivirga tractuosa
WP_013455131 130 MLIEAEIFRpaEFEQEYERLYQRMNIIGDSW-----INVYATFDEDNSVEYYGDLLFEMIYPYLTDKGKREY 196 Marivirga tractuosa
WP_014020546 129 TLEKEGYFYkeKFPGNFENLSVQILMLSDYWLS---HNSAVFGPNDIQFSYYSKLIFSAVLPYLTDKGLKAF 197 Cyclobacterium marinum
WP_013767634 135 ALQAGGWVQteRYPNQFQDWIQQASLLGDYWMAS--AEIMLEGDEEYKRKYHQGLFFSTLAPHLTAKGLESY 204 Haliscomenobacter hydro...
WP_013766841 132 MAVELGNIVqeQLPEQYQRLSHVIWMLVTFWC----VQHALREHKKVDVEEVRQCIWSLIMPILTPKGKHLF 199 Haliscomenobacter hydro...
WP_008202551 134 EFISSGFLKe-MEPAELQRLEHIIRMIITFWLS---QREVMTSYNFSEMGSMVKSIWTILNPYLTESGKAEY 201 Algoriphagus machipongo...
WP_015265092 136 RFKKEGLVDn-EIDTYAERLKKTIRIIITFWLA---QREVLGNPADNLEGEMAHHIWELITPHMTSEGKTVF 203 Echinicola vietnamensis
4_pfamImport  73 YYIETDRIIpeNDSIDYNKTIYNIWMTSTFWQSQ--KLAIHTASYTINKCGSIEMLWSILLPYLTTKGLEEY 142
Q6LR00       130 HLVSLGKLQ--CDNNSLPLLSDNLLLVSLNWLNYq-TLLDDKYSETELIRAGVLRLISMVEPYLTESARSPF 198 Photobacterium profundum
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