Conserved Protein Domain Family
Transpos_assoc

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pfam13963: Transpos_assoc 
Transposase-associated domain
Statistics
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PSSM-Id: 493843
Aligned: 15 rows
Threshold Bit Score: 98.9539
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_006583663    7 RTWMynrllPGQKGyTTEFLKGVKDFIDFACQqPkYLNEGVIR-CPCKLCKNAKH-LTPEEVNVHIIKKGFTPRYWFWTS 84 
Q0DCZ8          3 RRWI-----HGALF-TPDYIDGVRNFMKFVEE-R-FPGDAAIL-CPCSRCINQKS-MAQRDVERHILLNGMSSTYTRWIH 72  Japanese rice
5_pfamImport    1 RKWLy----YVHRS-STEYREGITEFVKFTDNdRkSRMSLYIS-CPCNDCRNEKMiPDSSEVYSHLIRRGFMENYTCWSK 74 
1_pfamImport    1 RRWMy----LQNWT-CDEYLAGLRSFIVASEVdMsMQQKSAIC-CPCIDCENMRKfSSSVDVHAHLIIRGFMHDYKCWNK 74 
3_pfamImport    1 RSWMyg--nIVKRH-NKEYRNEVLNFIKSTEEdRkRRNNNYMC-CLCADCKNKNMfDIRVDVHGHLIQRGFMEGYTCWVK 76 
7_pfamImport    1 RGWMyerldGRGGI-LSSFITGVNNFIQYACSqKnRMSGDNIK-CPCKKCHNLKY-MDVEMVKYHLFQYGFVENYFVWKY 77 
2_pfamImport    1 RDWMyngwsRGKAP-SNDWIENTNHFLDRAFSmPnLVEDGTIK-CPCALCRNYVT-QKRFDVEMHLCKYGFRVDYRVWTS 77 
ERM93393        5 RSWM-----KAHRR-SAEFRSGVDEFVAVATN---HVNADGLArCPCMRCLNVNF-HTPATIRVHLFLSGIQPSYNPWYF 74 
6_pfamImport    1 KSWMn----LPHRF-SQGYIAGVNAFIEFSCQ-H-NLDKDTIL-CPCQNCMNTSQ-KTVNEIRTHLVLYGIQISYKKWVF 71 
10_pfamImport   1 KDWM-----DLARY-SKLYIGGVEPFLDFACSyG-DPQGEESQ-CPCAKCCNICW-TRRNVVYDHLICYGFVKGYTRWIN 71 
XP_006583663   85 HGE 87 
Q0DCZ8         73 HGE 75  Japanese rice
5_pfamImport   75 HGE 77 
1_pfamImport   75 HGE 77 
3_pfamImport   77 HGE 79 
7_pfamImport   78 QGE 80 
2_pfamImport   78 HGE 80 
ERM93393       75 HGE 77 
6_pfamImport   72 HGE 74 
10_pfamImport  72 HGE 74 
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