3L5O


Conserved Protein Domain Family
DUF4213

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pfam13938: DUF4213 (This model is not part of the current CDD release)
Putative heavy-metal chelation
This domain of unknown function has an enolase N-terminal domain-like fold. Its genomic context suggests that it may have a role in anaerobic vitamin B12 biosynthesis. This domain is often found at the N-terminus of proteins containing DUF364, pfam04016. The structure of UnioProtKB:B8FUJ5, PDB:3l5o, suggests that the whole protein has this enolase N-terminal-like fold and an Rossmann-like C-terminal domain. Structural and bioinformatic analyses reveal partial similarities to Rossmann-like methyltransferases, with residues from the enolase-like fold combining to form a unique active site that is likely to be involved in the condensation or hydrolyzis of molecules implicated in the synthesis of flavins, pterins or other siderophores. The protein may be playing a role in heavy-metal chelation.
Statistics
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PSSM-Id: 521004
Aligned: 87 rows
Threshold Bit Score: 35.244
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3L5O_A         25 Daxin-gipEDFLVDELVCGTTHSVIRSGN-----------G----VGLGPN------------RpfetrxpxltqnLLG 76  Desulfitobacte...
Q2FME8         38 Reiar-aadPDPVIEDIRIYTNWVLVKAGKwslstifrgmpGltdpAGMDSW--------------------------MG 90  Methanospirill...
Q2LX32          9 Rriaa-dadPAACVEEIRIYANWVLVKTGKwsistyfhgmpGftdpAGMGTW--------------------------MG 61  Syntrophus aci...
WP_012158095   23 Es------mDPGILEKIIFSPKWTGVFADR-----------Gq---TGVAFNyagehlvygpv---kdlnsieglkrFIG 79  Alkaliphilus o...
Q24YG7         13 Rqe----glKPGRLTQLGYFPKWTVAMGDN-----------Gq---IGRAFHfdgehavyplr----dpdvllplqrFVG 70  Desulfitobacte...
WP_011832715    8 eglladlpeKPVPVRSVCIGAHWTAVCSTh----------------CGLAATiigeevhdhtivVrda-------ghLHE 64  Methanocorpusc...
WP_012185367    8 EalisyakeNNTEVKNAVIGVSWTCVYSRy----------------CGVSMTyrtg-----nasVrgf-------ghLEE 59  Caldivirga maq...
jgi:Mfer_0243   6 Eeli--ritKKYPVEDVRVGVSWTAVLSKy----------------CGVANTfsmfn--ihgnyTkdw-------gkLTE 58 
5_pfamImport    2 DeliesgreNDSPVRDVRAGVSWTGVHGKy----------------GGVCKTygipv--ahgnyTkdm-------geLTN 56 
Q972J1          5 Ekli--sitPEKKVRELVIGLGWTVVLSKy----------------AGMAMTyksnee-------------prniesLHE 53  Sulfurisphaera...
3L5O_A         77 ----LPLRVAAGCVK--SWNYVEASIGLAAINAY 104 Desulfitobacterium hafniense DCB-2
Q2FME8         91 dwlqKPGKESALELLs-STETLRRAVGMACLKSL 123 Methanospirillum hungatei JF-1
Q2LX32         62 dwigRPARAAALELLv-SREILKRSVGMACLKSL 94  Syntrophus aciditrophicus SB
WP_012158095   80 ----QSLFSLAEYLLplDEDIHMRSICLSTLNAL 109 Alkaliphilus oremlandii
Q24YG7         71 ----KSLLALAEELLa-ETDIQMRAACLAVLNAL 99  Desulfitobacterium hafniense Y51
WP_011832715   65 ----KSAQELAGYAL--SKNPLEAGIGVAAINSL 92  Methanocorpusculum labreanum
WP_012185367   60 ----MSVGELAEYLR--SWNLLEASVGLAAVNSI 87  Caldivirga maquilingensis
jgi:Mfer_0243  59 ----KDTRELAEYVK--SWNLIEASIGVAAINST 86 
5_pfamImport   57 ----KTTLELAEYAK--SWNLVEASIGVAALNSL 84 
Q972J1         54 ----IDTRKLAELLK--SWNFLEASIGLAAINST 81  Sulfurisphaera tokodaii
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