Conserved Protein Domain Family
mRNA_stabil

?
pfam13929: mRNA_stabil (493817 is an unknown moldel)
mRNA stabilisation
This domain is an mRNA stabilisation factor.
Statistics
?
PSSM-Id: 493817
Aligned: 10 rows
Threshold Bit Score: 323.136
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q75DR7       266 YSSTSSATADYARSSLQGGSNm--ENSDAPLFSLVDSLAQl---pETEELDPQEWIRSLDAKWAFIDLTE-----KHWQA 335 Eremothecium go...
XP_022464756 287 QSALDRRDFEAAHALVGFLNQl--EPPLTQLVQITDFLSRa---dAFSEVDVEALKGLFDKIWPSVIIGDa---sKYWST 358
XP_003678780 259 ADLLSNEDFNATQAIAQSKND----HSLHLLQTVVDSFANqt-vpVADPKKIEQWKAVFDSFWPLVLPQAta--sLYWSS 331
XP_056084260 304 RRSLQKQDFEEASRIIHNNPLn-eEHNIHSLQLIKDTLEGii--gQEKDVDVAQWKFFFDKHSGLRTVKQs---aMYWPL 377
A7TQF7       314 LKGLNKDNLHIKLKELDQLKSassLTDIDTLNFLSSAAKQls-nkQEKKVYFKGLQKMFESQWPLIIPRTns--dEFWSA 390 Vanderwaltozyma...
C5DGG6       319 IDALSRQDFDLVLNVVSASKM----DSLDILKAANQTLRSm---pYGVKIEGESWITFLDEVWPLAPYSQ-----DFWST 386 Lachancea therm...
Q6FPT1       322 RNELVKENFDSSKKLLADNPE----LREQLVKVAISTIEQir-dsTGASINTEKWYKFVSHNVPLVIQDT-----TFWDS 391 Nakaseomyces gl...
XP_003671639 249 nKFIKENEFENADQLLHSEEG---FFDLDVLSRLKVIYKHrphsnIENNVNIPNWKCYFDKHWPLILPKDgieseKYWKL 325
Q6CLH6       258 LEALTIQDLDSASKLIKEEKK--------PYHVIASALGRl---pNHIELDAENWIKLFNEATPTEGPLDy----EYWGA 322 Kluyveromyces l...
XP_003954639 254 VSLLRTQDFPKINNYLTRFKP---INTLDPLKSIVSTLSNm---qQDTSVDIENWKMVFDSFWPLVVISP-----DFWQL 322
Q75DR7       336 RWLMYRLLYVNRLHALQraqdgdsanldhlkrdLTFCYKtllEYFTLKQAMNGRLNKEELVGMLDIMLTQKEl--nGGYS 413 Eremothecium go...
XP_022464756 359 RFQFLKYLNTLRPKEYQ----------------ITRFYK---DFFLLQKARGTAPRGEDLVQMLKQVITNNN----ANPS 415
XP_003678780 332 RLRFLKMLNIANKTAYP----------------VRRIIT---DYLLLKRSTGFPLVQDDFLQFLQLVIINLSvnpkANYW 392
XP_056084260 378 RLKFAILLNKANSQLYS----------------DRVFLR---DYLLLKKSLGQELTREDLISLLKIVLKTEHs--sHSYF 436
A7TQF7       391 RSNFYKSCFELNPQQFS----------------LKDYFI---NCLLIKRVSGFKVEEKDLINFFNILSSSLLsnekSNYW 451 Vanderwaltozyma...
C5DGG6       387 RLELFKLLNCAAPGQVN----------------VDRVFT---GYLKFKLASGESLTKSDLVEFLQLVETNLSenshVDYE 447 Lachancea therm...
Q6FPT1       392 YLKFLLLLNDCNSQTYS----------------YKRLIP---DYLVTKRSMGEELTADDITTFLSVISERVNp---QNYW 449 Nakaseomyces gl...
XP_003671639 326 RLQFLTSLHKKYPQLYT----------------TRCISK---DYFLLKKSNGFQLTTADFVAFLKSLLLTPC----INKQ 382
Q6CLH6       323 RFKFFQLLYISKRNNIEentqldastikefnreLNYFIN---DFFRFKQLALCQPTREELIGFLEICIQHLKl--sKSYN 397 Kluyveromyces l...
XP_003954639 323 RFKFLTLLNVANPEIYH----------------CRRFFN---DYFKLKAYMGCELMKNEIISFLNVLVENKA------IA 377
Q75DR7       414 KLVKHNRVLQQLLDHYKFHe----pELFRDEQITIRTLKLMVSSQAK----LNVLSEFVRFLR---DT---GYTNRNVAI 479 Eremothecium go...
XP_022464756 416 TLSQGKHTVFKIVQLYDNE------SILHDNTVIDLLIGTMTNPTRKq--nTASLFEVVDYLL---DSq-hGILPPTTIT 483
XP_003678780 393 DLVESNSDIEKALKLFDDLnd---eTLLKDELVVTMLLRTMVLNDEKrt-hLHALYEVVDYLM---KT---RDLTPTMMA 462
XP_056084260 437 NLVKRNRVVVRALTLFKGLqseidgSIVYDEQVISLLLDTMITDERVk---LRSLYEVIDHIC---QTf-gDKLTSSMVI 509
A7TQF7       452 NLIKSNNLVVSALNLIDDE------RIIKNSQFIDTLLNTMIIDENKh---SRALYEIVDYLVynsERs-nKALEIPMIT 521 Vanderwaltozyma...
C5DGG6       448 DLVAKNKCVLEALKLYKGLd----pRLILDSEVMCLLLSTLSITQSGststLRAFYEMVEFAS---REf-sQEPPVPVTA 519 Lachancea therm...
Q6FPT1       450 DLVKANTQVVEALRLFDE-------EVIFTDAILSKVIKTLTTNSNEh--kLHSFYEVIKFLV---WKy-eKEIPINTLE 516 Nakaseomyces gl...
XP_003671639 383 SLIERNKTIVEMLSLYLSSaevsmeAIITNPEVISLLLRSLINDDRTiv-lQNPLQELLVYFK---TRgwsKKPQRKIII 458
Q6CLH6       398 QLISVNMWILKALQSYQYSd----pKVVHDPRVIKLLVKSMHTENTN----LNSLYEYVNLIT---NEfevRSLTNDVIK 466 Kluyveromyces l...
XP_003954639 378 GMTATNEIVSDLLYLMEKTnl--dqSIIFDTEIIRPLLHSTIKKDGTg---SSSFYEVVYFMT---DTr-gGFLTSKTLL 448
Q75DR7       480 KCIEILAEAKEWRELktFMFRDTTAALL---SDPMVWAHFLRSILAHGEPLLWRSLIDDGSILWLVRCGVDVRacEELHS 556 Eremothecium go...
XP_022464756 484 ALLKAIAATKQWDRL--LKFWEFDLKGVsvdSDYRPWPEFLQFIIDSNNGQLLQKVVTEGHLLWLKRYNVPIT--NTIRD 559
XP_003678780 463 SILEILGGIKDWNKF--FQFWELGARDLlpgQDYRPWAEFIKIIVNSNDTALMNKIVNEGHLLWLKRNEVEMT--RSIGS 538
XP_056084260 510 SILQSLAKIKDWIKL--VQVWETIAPVAeenRDTRPWNEFINIINQSGDSHVISKILNDGHLLWIKRLNVELT--PELRN 585
A7TQF7       522 IIINALCRVQNWSKL--WQFWDILGKNAnyrNDFRPWAEYLRLINKNGNETVHRKIIEDGQLLWIVRNDVPLT--KELTD 597 Vanderwaltozyma...
C5DGG6       520 TVLRILADKQDYARI--LRFWEKSIASsp-eKDHRPWPLFLDTVASTGDQEFAKKVIRDGHLLWIKRNGVKAS--PELRE 594 Lachancea therm...
Q6FPT1       517 TILKTLINFGEYDYL--LRLWTTKIGYNvgsKDTRPWKVFLKAITETQDVELIRLIIEKGCLLDISRGKVDVD--PQLAV 592 Nakaseomyces gl...
XP_003671639 459 SILDTLFELRDWKKV--FLFWNTQISRIgpdSDDRPWAHFIHLFNETNDLSTMKKLVTEGHLLQLKRFNTPID--ENLRK 534
Q6CLH6       467 EIITTLVESENWPTL--FKFWKQCLCes--aVDSNVWDFFIKSLLNKNDKVILSDIVDNGHLLWIHRSKLVIS--DDLKA 540 Kluyveromyces l...
XP_003954639 449 CVLEMLLETRNYDIF--FETWVKCIPLFs--HNCALWESFIKLVVASNDLKVMEKMIIDNHLLLLKRNNVSLT--QSLKL 522
Q75DR7       557 ALLELFQRA 565 Eremothecium gossypii ATCC 10895
XP_022464756 560 QIVAIFTRV 568
XP_003678780 539 QLDKLFEKl 547
XP_056084260 586 SIRDLLRTA 594
A7TQF7       598 QLSKFFSLS 606 Vanderwaltozyma polyspora DSM 70294
C5DGG6       595 AIERLFAVA 603 Lachancea thermotolerans CBS 6340
Q6FPT1       593 LLKTAFKTV 601 Nakaseomyces glabratus CBS 138
XP_003671639 535 NLEELFNKV 543
Q6CLH6       541 SLSKLLDRV 549 Kluyveromyces lactis NRRL Y-1140
XP_003954639 523 QIHRLFEAV 531
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap