Conserved Protein Domain Family
Katanin_con80

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pfam13925: Katanin_con80 (This model is not part of the current CDD release)
con80 domain of Katanin
The con80 domain of katanin is the C-terminal region of the protein that binds to the N-terminal domain of katanin-p60, the catalytic ATPase. The complex associates with a specific subregion of the mitotic spindle leading to increased microtubule disassembly and targeting of p60 to the spindle poles. The assembly and function of the mitotic spindle requires the activity of a number of microtubule-binding proteins. Katanin, a heterodimeric microtubule-severing ATPase, is found localized at mitotic spindle poles. A proposed model is that katanin is targeted to spindle poles through a combination of direct microtubule binding by the p60 subunit and through interactions between the WD40 domain and an unknown protein.
Statistics
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PSSM-Id: 520997
Aligned: 59 rows
Threshold Bit Score: 91.532
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002501939 722 PDGGTVSGILTARLTTLTACKNMWVKGDTRGVAETLAKS---GDQSAVVDVATAA-LDAPavagghETLTLELAAALTPL 797
XP_014331699 144 KDHSTMSDVLFGRNLRLKVALTLWRRNV-GELLTYFLKI---QDIGVIVDFLPIIcKCIDed---sPRINIGCCVDLFPL 216
Q38E06       369 TSSVTTVSVLRQRLTHLRVLRALWVQDNQQALVYLKELYttnSDYGVTADFLGAMqHLRMk-----ERITLSNLSDLLDV 443 Trypanosoma brucei
XP_003722864 418 HEHGTVSTTLQRRLNTLCTVRTLWMQNQPEAMAHVRQLYnegQEFGPLFDLLTVLqQSRMk-----EKLLTESITTFLDL 492
A0EFU4       252 LDHSKVKMILNERISKLKPIINLYAQNDMKQCIQQIRRC---NDNSALIDLFAMLrFDPAq-----RKLQAEDTFLLLES 323 Paramecium tetr...
XP_001027954 619 KEHQKFLILMNNRLNYVKPIQHWWNQGNSKSSLYAISQL---YDPCYVMDALQMTlNMNKl-----QYVNVEGVGTLLQK 690
A0EIB8       435 KDHSKVIQILNQRINYMKPIMHWWSNNNIKSAVNAINQL---SEPSILFDALLMCaQSTKf-----KSIPMEQLPQLLEK 506 Paramecium tetr...
A0CY73       460 KDHNRVMQILKQRINYMKPIMYWWSNNNIKSAINAINQL---VEPSILFDALTMCsQSSRf-----KSIPIEQMPQMLEK 531 Paramecium tetr...
A0CXK4       567 KDHNKVQSVLTQRMNYMKPILHWWSNNNLKSAMNAITQV---TEPSILQDALSLYsQSSKf-----GQVPIDSIPMLMEK 638 Paramecium tetr...
XP_010702874 418 REHGTVSATLQGRLNTLRAVRTLWTQNQSEAMVHVRRFCedgQEFGPLFDVLTVLqQPRMk-----EKMLTESIASVVDL 492 Leishmania pana...
XP_002501939 798 MRDLLKSPHASYVDLALRFARTVARRFMS--LLKSAP--EAM-EAvrrgGIGVDLVGEERA---TRAYSCVHALEALRPQ 869
XP_014331699 217 VRKVLSTPYEEYLIVGFKWICSVLKNWWV--ELQTSGynG---STqpllDENFQVFNQQ--------------LWELWQQ 277
Q38E06       444 VMYALAGERENQLLAALKVLKSMSSKFRP--KLDEARrqAPSfRNgeknSTSLTMEQYY---------ELSAKFDAVASV 512 Trypanosoma brucei
XP_003722864 493 VEIALKTDYEPLILLGLRTLRSICTKFRA--RMEEAQrrARA-SQstgyNDPLGTSQHQ---------HITQKLLNCCPV 560
A0EFU4       324 ATLLLNSKYSYQNIKGLEFIKFCFGQMKD--NILQYK------NTrkqlQNKVQDKNQNRQkayETLILQFDKIVKLPNF 395 Paramecium tetr...
XP_001027954 691 CKILIESKYQSHIKFGLEFVKKILEQYRD--ELINVKtfSLM--------SKVDLAREERIkkyNSLIDELRSIQKISRI 760
A0EIB8       507 CKILIDSKYLSHIRGGLLFCYRTFTTYRD--DIQTIKsfNQM--------SKVDLSREERIakyDKIVEQLKQIVQMSKL 576 Paramecium tetr...
A0CY73       532 CKVLIDSKYLSHIKGGIVFSYKAFNIYRDkqDIITIKcfNQM--------SKVDLSREERVakyDKIVEQLKQIIQMSKL 603 Paramecium tetr...
A0CXK4       639 ARILIESKYTNHIRGGLDFAWTTLNQFRD--EILNIKlfNQL--------SKADLTREERIqkyDRVIEQFKIIVQTPKL 708 Paramecium tetr...
XP_010702874 493 VEIALKTDYEPLILLGLHTLRSIATKFRA--RVEEAQrrARA-SQstgyNDPLGMNQHQ---------HIAKKLHDCCPI 560 Leishmania pana...
XP_002501939 870 LETIDRG-GGELAPRAREMRGLL 891
XP_014331699 278 EPLLKSV-TGQAENMAKVVESYL 299
Q38E06       513 VQKLGKR-KGPVGEEVREVLNEI 534 Trypanosoma brucei
XP_003722864 561 VFALAER-CDGVGEEARAVLPDM 582
A0EFU4       396 NKLLKAK-DINLVNLTSQIKNEI 417 Paramecium tetraurelia
XP_001027954 761 KKIVERKaKEDIGQLANLVLTDL 783
A0EIB8       577 TKLIERN-KMEVSELAKKLQIEM 598 Paramecium tetraurelia
A0CY73       604 TKLIERN-KEEISDLAKKFQIEM 625 Paramecium tetraurelia
A0CXK4       709 QKIIDRN-KEDLSDLAKKFQIEV 730 Paramecium tetraurelia
XP_010702874 561 VFVLAER-CDNVGEEAKAVLPDM 582 Leishmania panamensis
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