Conserved Protein Domain Family
DUF4209

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pfam13910: DUF4209 (This model is not part of the current CDD release)
Domain of unknown function (DUF4209)
This short domain is found in bacteria and eukaryotes, though not in yeasts or Archaea. It carries a highly conserved RNxxxHG sequence motif.
Statistics
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PSSM-Id: 520988
Aligned: 18 rows
Threshold Bit Score: 83.8714
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002672473 200 LERTLGDLLLLVSKKSKDNPND---LVSIIEnfrelkinELLMVEEIEEALGKEFVFIFRCFSGPLQGLNLRNVLWHGFL 276
WP_012545693 484 IEALIRNLAEMIGLPVLKQSRSggfNYRTLD--------ELLREDNIKQVFGEDMSLYLRVLFTDPRGWNLRNNVCHGIS 555 Thermodesulfovi...
WP_015807615 455 ieeAIRNVVELAGGNVLKESRSggfHVRTFD--------DILRDPIISEALDPELVNYYKILFTDQRGWNLRNNVCHGMT 526 Pedobacter hepa...
WP_015956131 486 IEAAIRNLVQMSNGVVLKSARGggfHLKALD--------ELLRSEQVKQSLGEDIALYLRVILTDQRGWNVRNNVCHGIF 557 Gloeothece citr...
WP_012389162 470 lENIIRFQLQLHNVKTTTLDPEgieTEVGLS--------KLMEKKEIIDIFGKELKFEIEALFSSNLGPNLRNQIAHGLA 541 Leptospira biflexa
WP_011812566 512 ieHLVRVHLKQAGAKTTNLDKDgieNENGMS--------TLMNLPEAEQVFGRNLAFELRALFCDAFGPNLRNELAHGLL 583 Verminephrobact...
XP_012038674 134 LERALGDVYLLIGKD----------CPFLLR--------DLLASEELAQVFGQPVMDVLKVFVGSPRGLNLRNVLWHGFA 195
XP_002115864 172 TERVLIDIIG-----SAAPTTE---RPRFLR--------DLLRSSQLTELFEPTAISCFYLLIGSPQGLNLRNLTWHGFI 235
XP_001746003 152 LECRLRTALASADSASATTATTpapAAALLLr-------DILLHPLLATWATRAERRLAWLLVGPPTGLNLRNLLWHGFI 224
XP_001847794 112 VEYSLGNLFL-----TKTGGIT---PPHLLR--------DLLMTDALATLLGETTIFLLRVLLGSPNGINLRNLVWHGFP 175
XP_002672473 277 DSENFPRCFASFLILLI 293
WP_012545693 556 HAGIFNEHIADRVLHAL 572 Thermodesulfovibrio yellowstonii
WP_015807615 527 NFEEFNYQTADRLIHAL 543 Pedobacter heparinus
WP_015956131 558 QQHLFSKSLTERLIHIL 574 Gloeothece citriformis
WP_012389162 542 NASLLNSTYSIYGWWLI 558 Leptospira biflexa
WP_011812566 584 DEEAFHSPFAIYAWWLg 600 Verminephrobacter eiseniae
XP_012038674 196 APREVPPKYCSMMLLLT 212
XP_002115864 236 RPKEIPKQCLTLLIVMT 252
XP_001746003 225 THSTPLPWTFWLILPLL 241
XP_001847794 176 SEGEVSELYRNFLVEML 192
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