6EZ4


Conserved Protein Domain Family
RPAP3_C

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pfam13877: RPAP3_C (This model is not part of the current CDD release)
Potential Monad-binding region of RPAP3
This domain is found at the C-terminus of RNA-polymerase II-associated proteins. These proteins bind to Monad and are involved in regulating apoptosis. They contain TPR-repeats towards the N_terminus.
Statistics
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PSSM-Id: 520960
Aligned: 111 rows
Threshold Bit Score: 39.9498
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6EZ4_A         16 PANSFQLESDFRQLKS---SPDMLY---QYLKQIEPSLYPKLFQKNLDPDVFNQIVK----ILHDFYIEKEKPL--LI-F 82  human
19_pfamImport   2 PKSTAEFHANWKDLSL----ENKFK----YLKSIEIQKLTNILGTGFESVHLTEILS----ILSTFYVEEKLEP-----Q 64 
18_pfamImport   2 PKSSAQFYTTWSGLDE----DLRYQ----YLKSLSGKPMNTLLGASLSNEMLSELLH----ILHKRFIPDRAEV-----S 64 
ETN63839      541 PKSTAQFYTTWSGLNE----DLRYQ----YLKLMKNAPLSKLLGASLSNQMLGEILY----ILKKHFIANQIDV-----T 603
EDS25752      525 PSNSVKFYHTWINLKT---VEDKYQ----YLQTTLKAPLHKLLGESMSSDFLGDVFH----ILLHFCEHQKASP-----L 588
XP_002005067  425 PSGTAQFYMTWKELSP----NQKYQ----YLKSIEIPNLCKILGAGFDSDTFTDLLR----TLNDFYVPNKEPT--T--A 488
XP_002074672  365 PMNTAQFYITWKELSP----AQKYK----YLKSIEIPNLCKILGAGFDSDTFTDLLH----TIQEFYVPNKEPT--T--A 428
EDX15641       14 PTSTAQFHVTWKELSG----PQKYQ----YLKSIEVPNLCKILGAGFDSDTFADLLR----TIHDYFVPNKEPN--T--A 77 
A0CMR4        114 CKNFRDFRTLFSKYYIkplTQENYAelmNILQMQSEDNIKKIFSIDFHVEYFFKILEvfdySI--STLKDGKEL--SFiV 189 Paramecium tet...
XP_001018525  128 ANSFRDFKKNFDSQYKfpiDDVAAQniyLIFKSQKEENFKKIFSLDFDVSYFIKIIKvmkyVIQESLVPNQNALelLFlM 207
6EZ4_A         83 EILQRLSELKRFDMAV-MFMSETEK 106 human
19_pfamImport  65 KVLREICKHENIGILA-LFMDGKDK 88 
18_pfamImport  65 HVLKEIVQNDSIGILS-LMMNKTDR 88 
ETN63839      604 NIMRGVAENECISILA-LMLNNEDR 627
EDS25752      589 AVLREVTQVSNVGLLV-LMLSEKEK 612
XP_002005067  489 AVMLEISKNDEFSILS-IFMSPEDK 512
XP_002074672  429 AVLYEISKNEEFVILA-MLMSTEEK 452
EDX15641       78 AILLEVSKNDEFTILA-MLMSAEEK 101
A0CMR4        190 GFLDELVKIKDFMQQIkKFLKKSEK 214 Paramecium tetraurelia
XP_001018525  208 EFLDQMSKVKDFQFSVpKFLSSKEK 232
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