2JMW


Conserved Protein Domain Family
Myb_DNA-bind_4

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pfam13837: Myb_DNA-bind_4 (This model is not part of the current CDD release)
Myb/SANT-like DNA-binding domain
This presumed domain appears to be related to other Myb/SANT-like DNA binding domains. In particular pfam10545 seems most related. This family is greatly expanded in plants and appears in several proteins annotated as transposon proteins.
Statistics
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PSSM-Id: 520930
Aligned: 110 rows
Threshold Bit Score: 43.0272
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2JMW_A          1 KKRAETWVQDETRSLIMFrr---gMDGL-------FNTSKsNKHLWEQISSKMRE-KGFDRSPTMCTDKWRNLLKEFKKA 69   thale cress
Q7QFV9          4 RNVWTPEETRELLTIIKEldl-mklFGE--------ERNTkLYQITENEMKQRGYfDKDAFQIEHKWKNLKRSYYKTKRE 74   Anopheles gam...
XP_002000931  116 RNLWSRVEMLEMLNIMQEmna-ldqLSDr------NVKSEhVFRQIEEAMRRKGLvKKSSIQIWTKWKFLKSTYNTTTRH 188 
XP_002071951   92 RNLWSRAEMLEMLSIMQNina-vqqLKDr------NIKSEhVFRQIEQIMRSKNYvKKSSIQIWTKWKFLKSTYNTTTRY 164 
XP_002052416    8 RNFWLTAEIECMLNLINEvrlsqgSAh--------TATTHnTFTQIASKMKRHGFpNKSPTQVRRKWFQMKSAYLCYKKG 79  
XP_002028523    8 RNFWVSAEIECMLKFIGEln----nVQRsis--anTTQn--TFNQIANKMKKSGYpNKSPTQIRRKWFQMKSAYLCYKKG 79  
Q7Q6N8          8 QLKWRDTEVEELIASMKErel--lalSDg-----kKRRSLeVFAVVRNDLLRKGY-FRTEEQIRRKMNELRKQYFEANRS 79   Anopheles gam...
11_pfamImport   1 RCKWAEGEVDVFLDLITSmgl-qtALl--------RKRNAkIFKLLSKEMSKKNY-IKGPDKLRIKFQLLRRLYNKVKN- 69  
8_pfamImport    1 RCKWTEGEVDMLLDLINTmglrraLl---------SKRNAkVFRALAREMAKRNC-NKGPDKLRIKFQLLRRMYNKVKNG 70  
XP_001959925   67 SLNWEEAERGLLLEVIKSkv---aFVENrsvdaksIKAKRlAWSQITKQFNALNFrHRLLEQIQVQWRSMKNSAKREHQQ 143 
2JMW_A         70 KhHDRGn-G-SA--K---MSYYKE 86   thale cress
Q7QFV9         75 N-YLAE--S-CE--Y---FEELDE 89   Anopheles gambiae str. PEST
XP_002000931  189 GnGIPK--V-VPeeV---YRVLCR 206 
XP_002071951  165 GtGTPK--V-VPeeV---YRVLCR 182 
XP_002052416   80 NvDRLFliP-EK--F---RSVIAQ 97  
XP_002028523   80 NiDRLFliP-ER--F---RNVIAQ 97  
Q7Q6N8         80 ElDSRY--ElCD--H---YEALHD 96   Anopheles gambiae str. PEST
11_pfamImport  70 --GSDE--S-FE--H---FEAMRK 83  
8_pfamImport   71 ---TGE--T-FE--H---FEAMRQ 83  
XP_001959925  144 KhPKSD--A-LE--GmrmIEFMEE 162 
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