Conserved Protein Domain Family
Replic_Relax

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pfam13814: Replic_Relax (493717 is an unknown moldel)
Replication-relaxation
This family includes proteins which are essential for plasmid replication and plasmid DNA relaxation.
Statistics
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PSSM-Id: 493717
Aligned: 24 rows
Threshold Bit Score: 99.0903
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Namu_4633   2 LTLIHDHKFLTTRQLQAL-AFTHHAselsaartTRRVLQRL-HRERLLAS-LPRRvgGMYG-----GAENPTWHLAPTGY 73 
WP_013385946   20 LMSIYSFRCLNENQIYQIhFQHVTPin----ekLSRELAKA-CIHDLLSFeLIKEvkYKGE--------EHVYFLTPSGI 86  Paenibacillus ...
Q2JEK1         26 LYDVGKVRVLSGAQLTRLhFHDLTAtsr--drtRRGVLARL-AGHDLVAP-LDRAvgGARS-----GSAGYVYALGVAGQ 96  Frankia casuar...
jgi:Caci_7331  62 LASLNEFRLLSGSQLRRLhCPGGEIstq--arkTRAIMRRL-TELGVVAR-AERGvgGIRS-----GSEGYVFGLSGLGH 132
1_pfamImport    1 LRDLRELRLMTGGQVLRQhFPDGHAetq--srkARAALARF-HRLGLVIR-LRRRigGVRA-----GSQGYVYGLTGLGL 71 
Q5LU27         33 LKHIERHGPQGSHYLYELtRDTHRCkd-----tTLRQMQKL-RAGGYLSLpHQQRatERAE------FNPYIYDLTQKAE 100 Ruegeria pomeroyi
WP_013489292   10 LQSIANLRFMNSQQIHTLhGYNGKYge----rvTRRKLNEL-EKKKMLKS-FQPS-----------AYEKKIYYLTKTAA 72  Evansella cell...
Q9X314         27 FTFLYYKRHLTTRQITQLySAFEGRdfs--edsVFTKLNRFsKYGAILTKkIDKRddSITRratfsLKDRMVDYLQEIG- 103 Bacillus anthr...
Q82Y99         85 LRMLGCVRIATVRQMASViTAEESDgr----syVRRAMKEL-AELGLAETng-------------kAGKHPIWNLTPAGQ 146 Streptomyces a...
WP_004152551   25 LRWLREELCSTAELVARRlGIAAVQp-------VYRFLDSL-VAKGLLVRtKYPVdgRQVS----------VWGLTPHGV 86  Gammaproteobac...
jgi:Namu_4633  74 RLHyl-----------------aSGGA-DDELPRRIREPSERTVK--HCLAVADARIAVEETARetgdvLVVRIVtePDN 133
WP_013385946   87 EVIrhffelptni------ydaqkkvvkRGYYRASELEIYPKNIN--HQAHLNQFVIDFQQLkldvnckyf--------- 149 Paenibacillus ...
Q2JEK1         97 RALpll---------------haDAVG-LPTRARRPWTPGQSFLK--HTLAISELYVQLVEAERag-rlTLTRFAaeAGA 157 Frankia casuar...
jgi:Caci_7331 133 AVLd------------------rDQPG-ARRH-RSAIESKSTFTA--HILACSELMCQLVEHSRag-gcTIEELRaePGC 189
1_pfamImport   72 AVLd------------------vGNPA-PPRH-RRDVETKPAFAN--HALAVAELRVQLTEFGRqh-stATVDFAaePLC 128
Q5LU27        101 DHLfdlgideptvrptghwwhsyMTSCvTSAIDIAALRAGVRFIPahEILAIKDVDLAIPIGr----------------- 163 Ruegeria pomeroyi
WP_013489292   73 KEL----------------------SH-FTGIEGIKTLKKNDKSM--HQVMVSEIYIQLQKCrigqvkry---------- 117 Evansella cell...
Q9X314        104 ----------------------------RIPKGSSKRRYSSSISL--HTLCSREILVRTLLE------------------ 135 Bacillus anthr...
Q82Y99        147 KALad----------------gnELPP-RPKAGTGAKAVKAGFGP--HGVAVTDTILAFGGRd-------------hLTD 194 Streptomyces a...
WP_004152551   87 AFSf------------------dEDEPlADVIPFQPSRVSAAHLP--HRLAVQSLRLDMEARgatgwril---------- 136 Gammaproteobac...
jgi:Namu_4633 134 WR-RYTDSMGtt-----------------------eVLKPDL--ELVTrtSDehghyedrWFLEVDLSTE----HP--PV 181
WP_013385946  150 ---------------------------dekhvsqytSIRPDGmlSILDt----------dFFLEMDMATE----SK--KQ 186 Paenibacillus ...
Q2JEK1        158 WW-----PDGag-----------------------gLVKPDA--SACVafGDve----dsWLVEVDRATE----SP--ET 197 Frankia casuar...
jgi:Caci_7331 190 WR-WFSSQSGgr-----------------------rPLKPDA--YVRLtvDDfd----laAFIEIDLATE----SL--PT 233
1_pfamImport  129 WR-RFPGPGGev-----------------------iTLKPDA--FVQVdrDGye----ltSFVEVDMATE----SL--PT 172
Q5LU27        164 -----------------------------------aHLIPDQlfALDYggr------yraFALEVDRGTEpktsPAkrKS 202 Ruegeria pomeroyi
WP_013489292  118 ----------------------------kvedkiheDLLVDAfvEYRLrstg----kkklIFVEADRGTE----SA--VI 159 Evansella cell...
Q9X314        136 ---TSKKTNTnkilseldirsyhqkqkkteiedaglLLIPDEhiSYLDk----------nIYIEMDMCKE----TN--AT 196 Bacillus anthr...
Q82Y99        195 WQvEVNHAIKet----------------------glSFNTDAvlAWPTkts-------evRLFELDNGSM----SQ--AR 239 Streptomyces a...
WP_004152551  137 -----------------------------hrlslkgMKVPDA-------------------LAELDGKTV----AFevER 164 Gammaproteobac...
jgi:Namu_4633 182 IVRQCQQYEAYRRTGQEQDrtgvfpLV 208
WP_013385946  187 LFEKWENYRNFLTSREYAYrekritVL 213 Paenibacillus polymyxa
Q2JEK1        198 LYRKLRRYVDFAGAG-QLGpdgvtpRV 223 Frankia casuarinae
jgi:Caci_7331 234 IASKCAVYLDYWRSGAEQRvagffpRV 260
1_pfamImport  173 IRRKLDVYVAYWRSGTEQAargvfpRT 199
Q5LU27        203 WKRSIEQYRQIIEKQRYKRhyglntNL 229 Ruegeria pomeroyi
WP_013489292  160 IEEKFKKYDYLYRSHKFQNmygifpDI 186 Evansella cellulosilytica
Q9X314        197 LVEKVGKYIEYAQ-----KntknitVV 218 Bacillus anthracis
Q82Y99        240 LAREVWDYERYAGHRVWEGargtigGT 266 Streptomyces avermitilis
WP_004152551  165 TVKSRRRYQEVVSGYLFNRkangidEI 191 Gammaproteobacteria
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