Conserved Protein Domain Family
DDE_Tnp_1_6

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pfam13751: DDE_Tnp_1_6 
Transposase DDE domain
Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.
Statistics
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PSSM-Id: 493663
Aligned: 21 rows
Threshold Bit Score: 96.6466
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012289966  88 ICANNKKLiRQKDR-VYTr-kSGFKEVQRVYRCFECNNCPYQKQC--NKYskk---dnPQTKSLRYNEE----FNKLRLE 156 Finegoldia magna
Q8TM48        43 ICPEKQSL-KFLYE-GYE---KERKRKYRLYKGTECKKCKFSKNC--TKR--------KDGIRHLKIAE----FSKERKQ 103 Methanosarcina ...
CAO80580     412 VCPNGKTL-TLDNE-EVVr-aNGPERTVKSYRCEDCQDCPFVQKCipYKN--------KSGKNLVYDPY----LSPLRQE 476
1_pfamImport   1 ICPMGQRM-RRIGT-RNVktaSGYVSENARYRAVRCEGCPLRCRC--FKA--------KGNRTIELNHR----LRQYKRR 64 
Q8A6A5       386 VCPMGQHM-NRIGT-RRDktaSGYITESARYKAQRCEGCPLCGSC--FKA--------RGNRMIEVNHR----LNQYKRQ 449 Bacteroides the...
Q97LA6        45 TCHNNRKL-SPSCIiHKKs-aSGYTSEVTVYECEICDNCTLKPKC--TKA--------KKNRKMQVSKA----FIKKREI 108 Clostridium ace...
WP_012937636 390 LCPNGKKF-KFVYR-KNIq-gNQYGRQEEIYECEDCNGCPYAERC--KKT--------PHNRRISLNRE----LTKVHAD 452 Acidaminococcus...
CCZ65111     139 RCPNGKSF-YLQYR-KNVk-gNKYGRQEEVYQCEDCSGCPYAEQC--KKT--------DKNRTVRINRE----LTAMHQE 201
WP_015817709 380 VCPEGNPM-WLKHE-TTDq-yGKCKLSFE-GRLTDCRHCPRKNEC--MRNpgsadtreGHGRQVTFTIDt---RNSPTAW 450 Teredinibacter ...
WP_011769773 376 RCPAGKEM-WLSVK-SIEtagRHYVRFSG-Y-LKDCRVCPLQAQC--MRKvp-----sKQGRQVQFETNkadkYISYTDK 444 Psychromonas in...
WP_012289966 157 SCENITSEEGIDERLNRSIQAEGMFSKMKEGLEYDRFRHRGLKGVLCDVNLLVLGINLNKLH 218 Finegoldia magna
Q8TM48       104 LAEKMKTEEAKEIYRQRQQVVEPAIGNYKENLGFREFLTRGIKSVRNEFNLVCTAVNLKKIW 165 Methanosarcina acetivorans
CAO80580     477 TVHNLQSKEGKKLMKKRCIEPEAVFASIKWNSKFSRFTVRSLSKCKNQLLLVLLGHNIQKFY 538
1_pfamImport  65 AKELLCSEKGLKHRGQRCIEPEAVFGQIKNNMNYKRFRHFGKDKVFMDFAFLAIAFNIKKMC 126
Q8A6A5       450 ARERLLSEEGIRHRGRRCIEPEAVFGQMKHNMAYKRFRHVGEDKVTMDFAFFAIAFNIKKMC 511 Bacteroides thetaiotaomicron
Q97LA6       109 SYNNIKTELGTKLRMNRSIQVEGAFGVLKSDYEFKRFLTRGKNSVKTEFILLCFGYNINKLH 170 Clostridium acetobutylicum
WP_012937636 453 VIGRLTDTRGFLLRRNRAIQAEGTFGVMKNDREYDRIVRRGMDSVKMEVFLVSIGFNLYKYH 514 Acidaminococcus fermentans
CCZ65111     202 VIENLESIQGALLRMNRSIQAEGTFGIMKNDRWYKRIVRRGIKSVLLEVFLVSIGHNLYKYH 263
WP_015817709 451 MQKRVDSRYGKQVYQHRMSVVEPVFANIGTQKGLDRFGLRGKKKVQGQWQLYCLVHNIEKLA 512 Teredinibacter turnerae
WP_011769773 445 MRVKIDSSPGRRQYSKRLGTIEPVFGNITVNKGMNKFTLRGQEKVNAQWQMYCLVHNIEKLR 506 Psychromonas ingrahamii
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