3CYG


Conserved Protein Domain Family
PdaC

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pfam13739: PdaC (This model is not part of the current CDD release)
Deacetylase PdaC
This domain forms an alpha-beta-two layer sandwich. It is found in the Bacillus subtilis proteins anti-sigma-V factor RsiV, which downregulates SigV activity, and peptidoglycan-N-acetylmuramic acid deacetylase PdaC, which catalyzes the deacetylation of N-acetylmuramic acid which makes the peptidoglycan resistant to lysosyme. It is found in association with Heat-shock cognate 70kd protein 44kd ATPase, pfam11738.
Statistics
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PSSM-Id: 520888
Aligned: 58 rows
Threshold Bit Score: 52.3458
Created: 16-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3CYG_A         14 STENEIVRIHVELPRLKYl----kDSNFEEKFNSE----------------------V-------EEKIKKFVNEVKGIA 60  Fervidobacteri...
WP_242404048   18 TTPENTI-VDINIPQAVG------DNEVALQINTIlkqhvsaslq--fnqedqrinaI-------EDQINSFNTEY---- 77  Formosa agarip...
WP_013869489   39 VEDTDAT-IEINIPKAEGat--naAKQINNTLNQFvnnal-------------dinnLktnetntTNSIAVFKKAYLDFK 102 Lacinutrix sp....
WP_008202646   38 CEDEKCAKVFVSYPVAAE-------TEVGKRINDEvmnhlmvyf-----rqdtvfadL-------KTASDDFIQSY---- 94  Algoriphagus m...
jgi:Phep_2924  60 ENVKDTTKAVLSYPVFAD-------QKINQFIEQKvmn----------------sanEgehyssyQDFSEAFVKNFD--- 113
WP_014373629   67 geEAQVTQIRLSYPKITDf----kAAEVKDSINAViyeimllnd-----ageiaydnL-------QQRLDAFIREYEMAK 130 Saprospira gra...
WP_014202606   56 dSAKNCVEVKIDELYINGgtnkasASKIEATLRKAlsetdnsega--prkpqdiianL-------EKEYTQISKDMKNYD 126 Owenweeksia ho...
WP_015782390   51 NCEDNCFSVSLNYLYCNG------NSEFAKNFNQEielqlsnfllsnddslqvegisI-------EKALDSLTKDY---- 113 Capnocytophaga...
WP_011744642   54 KEDRESY-CKCNYPVFSG-------RKNAEAINNHlqqwiadstaiapgknytgsksI-------ETLSDNFLKEY---- 114 Chlorobium pha...
WP_015925394   43 EKTDDSCSIKIIYPVLSGfs---sADKINDTLHNK------------------------------NLDLIGFIRREQAYL 89  Ruminiclostrid...
3CYG_A         61 qEDHDKDVQH-TPYEAYV--SVDVRYEGKD-FLSFVVYYYQFTGGAHGIT 106 Fervidobacterium nodosum Rt17-B1
WP_242404048   78 -TNFKNQFPE-SAQEWEAqiDGEVMYETPE-LISISLTSYTNTGGAHGIl 124 Formosa agariphila
WP_013869489  103 sQIGKTLYTDlPAWEVLV--DGEIIYKSET-LVSIAMNSSINTGGAHSNl 149 Lacinutrix sp. 5H-3-7-4
WP_008202646   95 -EEFKKDFPD-APGEWFNtiNATKTYESDS-LVSIEFSSSDFSGGAHPNS 141 Algoriphagus machipongonensis
jgi:Phep_2924 114 -DFSKENKDYaQTWFMNG--KVEVAARQPR-YLSFLYTFINYEGGAHPNT 159
WP_014373629  131 -EEMKKQLVLpNRWTCEV--EIKVVLNSNR-ILSLQLHEANFTGGAHPNS 176 Saprospira grandis
WP_014202606  127 -----------LSWEYIH--NMEVYLNDNN-LFGCSIYNYTFTGGAHPNg 162 Owenweeksia hongkongensis
WP_015782390  114 -YKLHEHFPElPAFEFIA--TDSIMWQNSK-MLSLVSNRYAFTGEAQPiq 159 Capnocytophaga ochracea
WP_011744642  115 -ERVRKDFPVnWPYVFML--DGSVLLNRSG-LLSIDLSSYSFTGGAHGSS 160 Chlorobium phaeobacteroides
WP_015925394   90 -DDYRKELPAeEKYFPQVaiDSSFDYNTSGnILSLVTNTYEYLGGAHGMT 138 Ruminiclostridium cellulolyticum
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