Conserved Protein Domain Family
DDE_Tnp_1_5

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pfam13737: DDE_Tnp_1_5 (This model is not part of the current CDD release)
Transposase DDE domain
Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.
Statistics
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PSSM-Id: 493652
Aligned: 10 rows
Threshold Bit Score: 155.232
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Mmc1_2789  25 VKRGRLTLWFDEEAIAGWHVK--Ep-pKKRGGVSVYTDTAILCGLTLRVLFKLPLRALQGLVGSVIDMLGLPLLTPDYST 101
Q7WXQ8         28 IARGDVTMWIDQSVLASPGVG--V---SKRGRPCVYSDAVIQMLLGLKQVFRLPLRALQGFAMSLRKLAFADLPVPNYST 102 Cupriavidus ne...
Q8E829         19 INRGSLTFWIDEDAIAKWKAK--Ve-pPKKGRPQLFSDLAITTALMVKRIFSMPLRALQGFINSVFKLGDIPLSCPHYTC 95  Shewanella one...
A0B5M1         17 VRRG--WFYLSTDFVNNWDEEllKmnkNKNGRPYRYPETFIQFCGLAYAFLHLPYRQLEGFIQALSGFVPG-LLAADYST 93  Methanothrix t...
hku:LHK_01023  22 QNRGNLTVWLSPHM--TW-LG--Gc-tGANGWPEVYTDAVIQTVLTLKLLFKLALRQARGLVCSLLKLPGLEWPVPCFST 95 
Q7NTL9         22 IQRGSLSVWLDTSM--SW-QA--Ap-rGKRGRTQTYSDVAIQFCLTIKNLFGLALRQTIGFIQSLLKLAGLGWGLPDYST 95  Chromobacteriu...
WP_020952385   21 KRRGSLMVWFDPEM--AW-FA--Vp-sGKAGHPERFSAAAIQFCLSIKVLFGLPLRQTTGFVESLLALSGFDWPVPDYTT 94  Paracoccus ami...
WP_012177568   22 RRRGSLLVWFDRDM--TW-LS--Er-tGKRGRPDVFSDAAIQFCLSVKVLFGLPLRQTSGMVASLLEMADLDWPVPDFST 95  Dinoroseobacte...
WP_020952554   22 KRRGSLLIWLDKDM--TW-LA--Pk-aGGNGRPPVFSDASVQFCLMVKVLFGLPLRQTTGMVASILSMAGLDWPVPDFST 95  Paracoccus ami...
WP_012161013   16 KQRGSVTFWLEQSAIVHWLET--Tp-rQKRGASLTYSDTAISTFETVKCIYGLAGRQTEGFLNSLFELMGIELPVCDHST 92  Acaryochloris ...
jgi:Mmc1_2789 102 FCRRQKGLNVPLPRQGKRKP--LHMVVDSTGLKVFGE 136
Q7WXQ8        103 LSRRAQDLNVVLPVQRASQS--LHLVVDSTGLKVFGV 137 Cupriavidus necator
Q8E829         96 ISKRAKTVNIAF--KTKTRGaiEHLAIDSTGLKVYGE 130 Shewanella oneidensis
A0B5M1         94 LWQRITNLELNIPIPDND----LVVAVDSTGMKVTNR 126 Methanothrix thermoacetophila PT
hku:LHK_01023  96 VSRRQATLTVTIPVRRRTEP--LHPLVDSTGLKICGE 130
Q7NTL9         96 LSRRQQTLQVKIPYQKSSGS--LHLLVDSTGIKMLGE 130 Chromobacterium violaceum
WP_020952385   95 LCRRQKHLKVQIPYRAASGP--LHLLVDSTGIKFSGE 129 Paracoccus aminophilus
WP_012177568   96 LCRRQRTLNVQIPYRRVDGP--LNLLVDSTGIKFLGD 130 Dinoroseobacter shibae
WP_020952554   96 LSRRQKRITVQISNRRASGP--LNLLVDSTGIKFLGd 130 Paracoccus aminophilus
WP_012161013   93 VSRRKGQLSISLPVIPKQGA--IHVVIDSTGVKVYGE 127 Acaryochloris marina
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